Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RN7SKP32-201ENST00000410167 303 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RPL21P111-201ENST00000418453 477 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 MRPL35P3-201ENST00000421557 364 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 UBE2V1P4-201ENST00000425374 344 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 CST2P1-201ENST00000425770 87 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC137499.1-201ENST00000427602 88 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 MED13P1-201ENST00000428342 171 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AL031274.1-201ENST00000450334 232 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RPS29P15-201ENST00000458329 171 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RNU7-125P-201ENST00000458760 62 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RPL30P1-201ENST00000488676 339 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC116562.3-201ENST00000506136 177 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RNU6-759P-201ENST00000516740 103 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 SNORA31.16-201ENST00000516773 139 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RNU2-46P-201ENST00000517038 113 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC109329.1-201ENST00000518744 317 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC068587.5-201ENST00000528506 175 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC087883.1-201ENST00000551882 391 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC009977.1-201ENST00000586015 570 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 VN1R80P-201ENST00000597126 338 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AL022161.1-201ENST00000604390 213 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 Z84480.1-201ENST00000605131 311 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC008250.2-201ENST00000615261 205 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AL353997.5-201ENST00000618886 171 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC022960.3-201ENST00000619794 441 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 AC022513.1-201ENST00000624512 117 ntBASIC0.78□□□□□ -2.28
CYSTM1Q9H1C7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-1287P-201ENST00000362914 107 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNA5SP99-201ENST00000364020 114 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-1060P-201ENST00000384664 107 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 SNORA64-201ENST00000384674 134 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 SNORD115.1-201ENST00000391109 76 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RPL23AP32-201ENST00000395315 459 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 MIR1323-201ENST00000408090 73 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-584P-201ENST00000410350 95 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNA5SP100-201ENST00000410903 110 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNA5SP59-201ENST00000410922 110 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RNU6-293P-201ENST00000411259 106 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 SRIP3-201ENST00000413200 219 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 BTF3L4P1-201ENST00000413813 468 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 CYCSP33-201ENST00000414485 327 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RPL31P35-201ENST00000431058 377 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC007969.2-201ENST00000441891 191 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 NDUFB1P2-201ENST00000449477 176 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC116337.1-201ENST00000509680 687 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 MTCO3P28-201ENST00000513351 515 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC019176.1-201ENST00000518519 225 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 TRAV32-201ENST00000553993 340 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC021231.3-201ENST00000558497 370 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC137800.2-201ENST00000574375 120 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 MIR5692A1-201ENST00000580523 69 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 WISP1-OT1-201ENST00000602893 642 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RMST_4.1-201ENST00000616886 107 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 U1.36-201ENST00000620684 176 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC009878.1-201ENST00000621819 340 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 MIR8063-201ENST00000621930 81 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 RMST_7.1-201ENST00000621935 268 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 SNORD98-201ENST00000636377 67 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 U6.114-201ENST00000636407 96 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC006927.3-201ENST00000638789 384 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.77□□□□□ -2.29
CYSTM1Q9H1C7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.76□□□□□ -2.29
CYSTM1Q9H1C7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CYSTM1Q9H1C7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms