Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AL008629.1-201ENST00000438615 184 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01554Q52M75 RPL39P28-201ENST00000465655 155 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC079140.3-201ENST00000511111 550 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01554Q52M75 RNU5F-2P-201ENST00000516066 82 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC068587.4-201ENST00000533893 186 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC091544.4-201ENST00000555268 342 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC136932.1-201ENST00000574771 208 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01554Q52M75 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.68□□□□□ -2.3
LINC01554Q52M75 AL391646.1-201ENST00000603860 190 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC018889.1-201ENST00000605372 397 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 BX284668.6-201ENST00000606899 438 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 AC091965.4-201ENST00000607691 587 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.68□□□□□ -2.3
LINC01554Q52M75 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01554Q52M75 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
LINC01554Q52M75 MIR340-201ENST00000362125 95 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 Y_RNA.500-201ENST00000384466 111 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 RNU4-26P-201ENST00000410270 107 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 BTF3P4-201ENST00000418852 495 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 AC245047.4-201ENST00000433189 144 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 AC007969.2-201ENST00000441891 191 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 RNU2-10P-201ENST00000516375 211 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 AC115990.1-201ENST00000526957 301 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 AL512310.1-201ENST00000548639 172 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 DNAJC19P9-201ENST00000555084 351 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01554Q52M75 AC103987.3-201ENST00000582071 292 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 MIR548AC-201ENST00000585049 88 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 AL590229.1-201ENST00000603497 542 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 RNU6-1192P-201ENST00000612197 107 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 AL359547.2-201ENST00000615810 418 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 RNU6-489P-201ENST00000618289 107 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 7SK.13-201ENST00000622040 250 ntBASIC0.67□□□□□ -2.3
LINC01554Q52M75 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01554Q52M75 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 RNU6-1019P-201ENST00000364424 107 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 RNU6-723P-201ENST00000383973 107 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 RNU6-203P-201ENST00000384038 104 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 SNORA70B-201ENST00000384210 135 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 MIR194-1-201ENST00000384892 85 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 MIR517C-201ENST00000385103 95 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 SNORA12-201ENST00000391162 147 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 RAP1BP3-201ENST00000407180 549 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 MIR1323-201ENST00000408090 73 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 MTCO3P41-201ENST00000414801 328 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 PRPS1P1-201ENST00000445305 876 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 snoU13.30-201ENST00000458951 104 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 AC116353.3-201ENST00000511215 249 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 RNU6-295P-201ENST00000516901 104 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 RNU6-250P-201ENST00000516958 103 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 SNORA31.24-201ENST00000517232 57 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 AC023050.2-201ENST00000544968 387 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 MTND4LP25-201ENST00000570218 163 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 VN1R80P-201ENST00000597126 338 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 AL022345.2-201ENST00000606307 135 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 AC144521.1-201ENST00000607148 956 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 RNU6-87P-201ENST00000607561 108 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.66□□□□□ -2.3
LINC01554Q52M75 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.66□□□□□ -2.3
LINC01554Q52M75 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
LINC01554Q52M75 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
LINC01554Q52M75 RNU4-15P-201ENST00000362613 141 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 SNORD114-1-201ENST00000362705 72 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 SNORA63D-201ENST00000364359 132 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 RNU6-384P-201ENST00000364900 104 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 Y_RNA.472-201ENST00000384322 102 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 MIR758-201ENST00000390227 88 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
LINC01554Q52M75 POLR2J4-204ENST00000418424 324 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 AC099677.2-201ENST00000436385 175 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01554Q52M75 SNRPEP8-201ENST00000442866 260 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.65□□□□□ -2.31
LINC01554Q52M75 RPS29P28-201ENST00000446439 141 ntBASIC0.65□□□□□ -2.31
LINC01554Q52M75 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms