Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC61Q9Y6R9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 AC140134.1-201ENST00000511830 3544 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 Y_RNA.49-201ENST00000362714 112 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-1014P-201ENST00000383940 103 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-1124P-201ENST00000384169 107 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 SNORA70E-201ENST00000384492 135 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 SNORA26.3-201ENST00000391119 136 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 SNORA48.5-201ENST00000391143 135 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 MIR1263-201ENST00000408324 86 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 AC011998.1-201ENST00000433403 117 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 MRPS21P3-201ENST00000436696 262 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 REREP2Y-201ENST00000439103 200 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 MIR3921-201ENST00000577308 85 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 MIR4512-201ENST00000583257 77 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 VN1R85P-201ENST00000601587 426 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 AC091979.2-201ENST00000607514 214 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 MIR3653-201ENST00000625572 110 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 CPHL1P-201ENST00000461341 3407 ntBASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC61Q9Y6R9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 OFD1P6Y-202ENST00000451061 2724 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 SNRPEP9-201ENST00000436794 238 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 PHBP16-201ENST00000446318 950 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 RPL39P34-201ENST00000477141 156 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 AC006517.1-201ENST00000480485 328 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 AC105137.1-201ENST00000484355 562 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 AC026402.1-201ENST00000513642 170 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 SNORA70.12-201ENST00000516084 153 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 MRPL49P2-201ENST00000521066 465 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 AC074050.1-201ENST00000563247 211 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 MIR2052-201ENST00000636055 55 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 AC133552.1-201ENST00000569988 4007 ntBASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC61Q9Y6R9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-228P-201ENST00000362700 106 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-249P-201ENST00000363016 102 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 Y_RNA.432-201ENST00000384087 111 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 Y_RNA.528-201ENST00000384575 108 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 MIR518D-201ENST00000385014 87 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 MLLT10P2-201ENST00000506434 249 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 CR383656.8-201ENST00000549046 145 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 MIR4716-201ENST00000579628 84 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 AC011471.1-201ENST00000585766 187 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 AL137843.1-201ENST00000605078 385 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 ZYXP1-201ENST00000617638 118 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 MIR548AY-201ENST00000617669 107 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC61Q9Y6R9 AC005332.5-201ENST00000591222 2919 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 TTC41P-205ENST00000551270 3963 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 AC092376.2-201ENST00000622621 4116 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-508P-201ENST00000363231 103 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 Y_RNA.221-201ENST00000364248 96 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 U1.1-201ENST00000384101 164 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 SNORA37-201ENST00000384504 129 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 MIR570-201ENST00000384917 97 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 Y_RNA.587-201ENST00000391210 103 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 MIR1290-201ENST00000408735 78 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 SNORA36B-201ENST00000410438 131 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 RNU2-55P-201ENST00000411146 174 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 CKS1BP6-201ENST00000424932 240 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 RPS12P10-201ENST00000427031 377 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 SNORA31.9-201ENST00000516429 84 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 RNU6-521P-201ENST00000516663 105 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 RNU1-104P-201ENST00000517280 175 ntBASIC6.22□□□□□ -1.41
CCDC61Q9Y6R9 AL160236.1-201ENST00000556317 195 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms