Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NFKB1P19838 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NFKB1P19838 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NFKB1P19838 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.74□□□□□ -1.65
NFKB1P19838 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NFKB1P19838 RNU6-858P-201ENST00000362436 107 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 SNORA74A-201ENST00000364089 198 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 RNU4-9P-201ENST00000364951 139 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 BX510359.2-201ENST00000417920 305 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 AL590762.4-201ENST00000425885 253 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.74□□□□□ -1.65
NFKB1P19838 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.74□□□□□ -1.65
NFKB1P19838 H2AFZP5-201ENST00000446960 382 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 AC009963.2-201ENST00000453431 138 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 AC010326.1-201ENST00000462726 602 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.74□□□□□ -1.65
NFKB1P19838 RN7SL826P-201ENST00000479724 288 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 NIP7P2-201ENST00000485801 544 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 RN7SL346P-201ENST00000491561 294 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 RPL36AP41-201ENST00000493820 306 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.74□□□□□ -1.65
NFKB1P19838 RNU6-377P-201ENST00000515965 102 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 RNU7-200P-201ENST00000516105 62 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 SNORD116-28-201ENST00000516123 91 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 AC022559.1-201ENST00000520905 205 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
NFKB1P19838 AL110118.1-201ENST00000553543 400 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 BRDTP1-201ENST00000605735 677 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 AL590240.4-201ENST00000616908 390 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.74□□□□□ -1.65
NFKB1P19838 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NFKB1P19838 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NFKB1P19838 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NFKB1P19838 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NFKB1P19838 SDAD1P1-202ENST00000524156 2051 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NFKB1P19838 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NFKB1P19838 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.74□□□□□ -1.65
NFKB1P19838 AC090740.1-201ENST00000623193 2262 ntBASIC4.74□□□□□ -1.65
NFKB1P19838 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.73□□□□□ -1.65
NFKB1P19838 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NFKB1P19838 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NFKB1P19838 MAPK10-263ENST00000641052 4307 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.73□□□□□ -1.65
NFKB1P19838 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NFKB1P19838 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NFKB1P19838 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NFKB1P19838 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 RNU6-740P-201ENST00000364734 105 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 RNU6-336P-201ENST00000364891 107 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 Y_RNA.292-201ENST00000364904 97 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 MIR34A-201ENST00000385130 110 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 SNORA40C-201ENST00000391285 128 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 MIR937-201ENST00000401271 86 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 RPL19P1-201ENST00000411635 428 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 Z85995.1-201ENST00000415547 335 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 AC140479.3-201ENST00000418944 1126 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 RPS6P12-201ENST00000432491 726 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.73□□□□□ -1.65
NFKB1P19838 Z82188.1-201ENST00000436709 154 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 AC016831.4-201ENST00000438302 307 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 PTMAP3-201ENST00000447474 330 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 snoU13.30-201ENST00000458951 104 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 RPL21P104-201ENST00000464143 478 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 Y_RNA.662-201ENST00000516028 97 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 SCARNA15.2-201ENST00000516409 127 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 RNU2-31P-201ENST00000516954 155 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.73□□□□□ -1.65
NFKB1P19838 AC209154.1-201ENST00000582156 337 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 SNORD113-5-201ENST00000607261 78 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.73□□□□□ -1.65
NFKB1P19838 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.73□□□□□ -1.65
NFKB1P19838 U4.7-201ENST00000638126 106 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NFKB1P19838 AC093535.2-201ENST00000624769 2326 ntBASIC4.73□□□□□ -1.65
NFKB1P19838 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.73□□□□□ -1.65
NFKB1P19838 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NFKB1P19838 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.72□□□□□ -1.65
NFKB1P19838 MAPK10-349ENST00000641767 3661 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NFKB1P19838 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NFKB1P19838 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NFKB1P19838 RNU6-222P-201ENST00000362438 107 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 RNU6-173P-201ENST00000364215 104 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 Y_RNA.245-201ENST00000364493 95 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 SNORD96B-201ENST00000386148 79 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NFKB1P19838 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NFKB1P19838 RN7SKP267-201ENST00000410381 285 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.72□□□□□ -1.65
NFKB1P19838 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AC005002.2-201ENST00000438228 269 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 RPL23AP24-201ENST00000458203 385 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AC091021.1-201ENST00000468051 388 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AL160314.1-201ENST00000490836 438 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.72□□□□□ -1.65
NFKB1P19838 RNU6-346P-201ENST00000516288 111 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 SNORA31.19-201ENST00000517079 126 ntBASIC4.72□□□□□ -1.65
NFKB1P19838 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms