Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL391646.1-201ENST00000603860 190 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 NUTF2P8-201ENST00000604593 363 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC093838.1-201ENST00000613014 469 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC006338.1-201ENST00000618453 749 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC110994.2-201ENST00000635481 492 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC007785.2-201ENST00000598627 1916 ntBASIC3.23□□□□□ -1.89
DDX43Q9NXZ2 AC000403.1-201ENST00000613696 3585 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC073325.2-201ENST00000339545 159 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL590002.1-201ENST00000406554 418 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 RNU4-55P-201ENST00000410731 137 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 RN7SKP58-201ENST00000411010 305 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 RPL7P46-201ENST00000425129 740 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL353777.1-201ENST00000425552 326 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 ISCA1P6-201ENST00000427740 390 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 TIMM9P3-201ENST00000428659 274 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC022018.1-201ENST00000430685 241 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 MTCO2P11-201ENST00000431069 680 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 TPT1P14-201ENST00000448018 505 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 C1DP4-201ENST00000455429 424 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 RPS29P25-201ENST00000481709 171 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 RN7SL20P-201ENST00000488827 297 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 Y_RNA.672-201ENST00000516289 104 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 RNU6-1282P-201ENST00000516735 96 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 HMGB1P33-201ENST00000563485 527 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 MIR3682-201ENST00000581338 84 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC091135.1-201ENST00000585943 307 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AP000907.4-201ENST00000604143 237 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL359999.1-201ENST00000604513 294 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL391813.2-201ENST00000609113 322 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL049641.1-201ENST00000441055 1948 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AC091564.4-201ENST00000533934 2194 ntBASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
DDX43Q9NXZ2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 RNU6-1090P-201ENST00000364065 94 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 RNU6-282P-201ENST00000365357 103 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 RNU1-39P-201ENST00000383897 165 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 MIR325-201ENST00000385260 98 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 FCF1P10-201ENST00000407590 479 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 CBWD4P-201ENST00000445695 655 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC132479.1-201ENST00000449160 144 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 SNORA59A-201ENST00000459326 152 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC117440.1-201ENST00000474107 571 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AL135752.1-201ENST00000479477 471 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC022616.6-201ENST00000520479 119 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC123904.2-201ENST00000548059 300 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 HMGB1P6-201ENST00000569046 646 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 NRBF2P1-201ENST00000587407 859 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC008277.2-201ENST00000605196 797 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 RNU6-87P-201ENST00000607561 108 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC017083.3-201ENST00000609955 700 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC025253.1-201ENST00000613623 543 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC002553.4-201ENST00000616896 331 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 AC009159.1-201ENST00000618386 642 ntBASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX43Q9NXZ2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 Y_RNA.159-201ENST00000363674 87 ntBASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 RNU6-741P-201ENST00000383889 107 ntBASIC3.2□□□□□ -1.9
DDX43Q9NXZ2 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms