Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-5P-201ENST00000384238 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-3P-201ENST00000384314 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-16P-201ENST00000384385 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNY3P4-201ENST00000384428 101 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-15P-201ENST00000384534 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-2-201ENST00000384627 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-29P-201ENST00000384637 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 Y_RNA.541-201ENST00000384640 113 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-9-201ENST00000384776 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NFKB1P19838 MIR190B-201ENST00000401119 79 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 TMSB4XP3-201ENST00000445144 114 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 EIF4A1P11-201ENST00000451239 222 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 AC079354.2-201ENST00000453523 154 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 ISCUP1-201ENST00000454451 448 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RN7SL558P-201ENST00000497468 299 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-143P-201ENST00000516942 93 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNA5SP471-201ENST00000516971 106 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 HIGD1AP5-201ENST00000529959 259 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.93□□□□□ -1.62
NFKB1P19838 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.93□□□□□ -1.62
NFKB1P19838 RNF138P2-201ENST00000603490 592 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 RNU6-6P-201ENST00000606623 107 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.93□□□□□ -1.62
NFKB1P19838 U2.14-201ENST00000615943 113 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 AL353748.2-201ENST00000622148 471 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 AC091905.4-201ENST00000623432 202 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.93□□□□□ -1.62
NFKB1P19838 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NFKB1P19838 AP001148.1-201ENST00000624124 2359 ntBASIC4.93□□□□□ -1.62
NFKB1P19838 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.93□□□□□ -1.62
NFKB1P19838 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NFKB1P19838 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NFKB1P19838 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
NFKB1P19838 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NFKB1P19838 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 AC107068.1-201ENST00000563286 4218 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.92□□□□□ -1.62
NFKB1P19838 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 MIR411-201ENST00000362239 96 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 Y_RNA.199-201ENST00000364014 102 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 RNU6-384P-201ENST00000364900 104 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 SNORA70E-201ENST00000384492 135 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NFKB1P19838 SPTLC1P2-201ENST00000407089 121 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 RNU6-1140P-201ENST00000410517 106 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AL513331.1-201ENST00000411908 397 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.92□□□□□ -1.62
NFKB1P19838 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 MTATP6P4-201ENST00000427725 675 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.92□□□□□ -1.62
NFKB1P19838 RPL23AP22-201ENST00000437556 453 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC098831.1-201ENST00000440661 216 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC112498.1-201ENST00000444401 332 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 RN7SKP210-201ENST00000459176 261 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 RNA5SP228-201ENST00000516232 133 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC008694.2-201ENST00000517591 306 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC010186.2-204ENST00000537668 439 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AP002392.1-201ENST00000537692 208 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 AP002770.2-201ENST00000543613 532 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NFKB1P19838 MIR4643-201ENST00000577473 78 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 U73479.1-201ENST00000618062 168 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC018445.2-201ENST00000622987 260 ntBASIC4.92□□□□□ -1.62
NFKB1P19838 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
NFKB1P19838 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NFKB1P19838 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NFKB1P19838 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.92□□□□□ -1.62
NFKB1P19838 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NFKB1P19838 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.91□□□□□ -1.62
NFKB1P19838 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NFKB1P19838 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.91□□□□□ -1.62
NFKB1P19838 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NFKB1P19838 RNU6-512P-201ENST00000364438 103 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NFKB1P19838 RNU6-837P-201ENST00000391056 108 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 AL080315.1-201ENST00000406055 466 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.91□□□□□ -1.62
NFKB1P19838 AL117339.3-201ENST00000418733 162 ntBASIC4.91□□□□□ -1.62
NFKB1P19838 TMEM167AP1-201ENST00000423409 219 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms