Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AL136038.3-201ENST00000561909 1096 ntBASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.8■■□□□ 1.4
SH3TC1Q8TE82 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 VENTXP5-201ENST00000523979 775 ntBASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH3TC1Q8TE82 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 ZNF444P1-201ENST00000559497 298 ntBASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 GPAT2P1-201ENST00000444924 1672 ntBASIC23.78■■□□□ 1.4
SH3TC1Q8TE82 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 KRT18P56-201ENST00000507275 550 ntBASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH3TC1Q8TE82 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH3TC1Q8TE82 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 AC093458.2-201ENST00000623150 629 ntBASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH3TC1Q8TE82 LINC01311-201ENST00000565162 1445 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms