Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC004980.1-204ENST00000429707 299 ntBASIC18.42■□□□□ 0.54
KRT78Q8N1N4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.42■□□□□ 0.54
KRT78Q8N1N4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 TMEM191A-211ENST00000637163 1067 ntBASIC18.42■□□□□ 0.54
KRT78Q8N1N4 AL031985.4-201ENST00000642138 673 ntBASIC18.42■□□□□ 0.54
KRT78Q8N1N4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT78Q8N1N4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 Z85996.1-201ENST00000494644 937 ntBASIC18.41■□□□□ 0.54
KRT78Q8N1N4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 AP001412.1-201ENST00000608405 714 ntBASIC18.41■□□□□ 0.54
KRT78Q8N1N4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT78Q8N1N4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 AC026271.3-201ENST00000571884 352 ntBASIC18.4■□□□□ 0.54
KRT78Q8N1N4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 FP475955.4-201ENST00000623131 1990 ntBASIC18.4■□□□□ 0.54
KRT78Q8N1N4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT78Q8N1N4 AL161938.1-201ENST00000569833 2180 ntBASIC18.4■□□□□ 0.54
KRT78Q8N1N4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
KRT78Q8N1N4 KRT8P41-201ENST00000533985 1514 ntBASIC18.39■□□□□ 0.54
KRT78Q8N1N4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT78Q8N1N4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT78Q8N1N4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.38■□□□□ 0.53
KRT78Q8N1N4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms