Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.58□□□□□ -1.68
EPHB3P54753 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
EPHB3P54753 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHB3P54753 SAGE2P-201ENST00000420011 2126 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
EPHB3P54753 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHB3P54753 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHB3P54753 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
EPHB3P54753 RNU6-562P-201ENST00000362731 107 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNU5E-6P-201ENST00000365574 115 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNU6-1226P-201ENST00000384317 107 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 SNORA24.1-201ENST00000384401 135 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 Y_RNA.552-201ENST00000384665 112 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.57□□□□□ -1.68
EPHB3P54753 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.57□□□□□ -1.68
EPHB3P54753 AL356968.1-201ENST00000416622 474 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 EZH2P1-201ENST00000431167 291 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHB3P54753 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.57□□□□□ -1.68
EPHB3P54753 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.57□□□□□ -1.68
EPHB3P54753 FTH1P9-201ENST00000513251 355 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNU6-470P-201ENST00000515954 104 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNA5SP446-201ENST00000515955 82 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNU6-475P-201ENST00000516073 104 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNY3P15-201ENST00000516297 97 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNA5SP49-201ENST00000516450 115 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 RNU6-699P-201ENST00000517081 110 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 AC009229.3-201ENST00000608056 282 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 AL445363.3-201ENST00000623080 671 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 AC067931.1-201ENST00000624190 671 ntBASIC4.57□□□□□ -1.68
EPHB3P54753 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHB3P54753 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHB3P54753 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
EPHB3P54753 AC000123.3-201ENST00000624029 4975 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
EPHB3P54753 Z95327.2-201ENST00000414579 1873 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
EPHB3P54753 RNU6-1287P-201ENST00000362914 107 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 Y_RNA.404-201ENST00000383978 102 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 Y_RNA.447-201ENST00000384184 113 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 RNU6-1060P-201ENST00000384664 107 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
EPHB3P54753 MIR450B-201ENST00000401182 78 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 SNORA11-201ENST00000408789 128 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 RNU6-387P-201ENST00000411331 105 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 RPL36AP10-201ENST00000421785 322 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHB3P54753 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.56□□□□□ -1.68
EPHB3P54753 ARL5AP4-201ENST00000430731 512 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.56□□□□□ -1.68
EPHB3P54753 IFNWP4-201ENST00000453148 294 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHB3P54753 RPL35AP15-201ENST00000468042 339 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
EPHB3P54753 RN7SL691P-201ENST00000494487 301 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.56□□□□□ -1.68
EPHB3P54753 AC026402.1-201ENST00000513642 170 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 RNU6-408P-201ENST00000515910 100 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 RNU6-1143P-201ENST00000516125 104 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
EPHB3P54753 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.56□□□□□ -1.68
EPHB3P54753 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHB3P54753 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 RN7SL435P-201ENST00000584418 282 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 AL591034.3-201ENST00000605511 685 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 DUSP12P1-201ENST00000612874 516 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 MIR6128-201ENST00000615528 109 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHB3P54753 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 MAPK10-349ENST00000641767 3661 ntBASIC4.56□□□□□ -1.68
EPHB3P54753 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHB3P54753 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.55□□□□□ -1.68
EPHB3P54753 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 AL592437.2-201ENST00000421655 2434 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-874P-201ENST00000362390 105 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-266P-201ENST00000364225 107 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 Y_RNA.389-201ENST00000383924 113 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-1293P-201ENST00000384077 107 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-1127P-201ENST00000384580 107 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-550P-201ENST00000391057 101 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.55□□□□□ -1.68
EPHB3P54753 RNA5SP317-201ENST00000410176 116 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-1050P-201ENST00000410388 107 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNA5SP311-201ENST00000411290 116 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RPL30P3-201ENST00000424262 333 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AL138785.1-201ENST00000425821 331 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AL157831.1-201ENST00000426134 473 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.55□□□□□ -1.68
EPHB3P54753 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.55□□□□□ -1.68
EPHB3P54753 MTCO3P45-201ENST00000443036 613 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms