Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
TMEM88BA6NKF7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TMEM88BA6NKF7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TMEM88BA6NKF7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 RNU6-1115P-201ENST00000362490 106 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 Y_RNA.245-201ENST00000364493 95 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 RNU6-1303P-201ENST00000364841 107 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 RNU6-1329P-201ENST00000365664 107 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 HMGB1P9-201ENST00000429856 646 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AL162151.2-201ENST00000448875 158 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 DHFRP3-201ENST00000455595 559 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 Y_RNA.670-201ENST00000516255 105 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 RNA5SP471-201ENST00000516971 106 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 Y_RNA.720-201ENST00000517166 92 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AC022884.2-201ENST00000578535 580 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 RPL7P50-201ENST00000600588 727 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 MIR6133-201ENST00000617057 108 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AC092608.2-201ENST00000624427 218 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 AC000095.2-202ENST00000637415 154 ntBASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMEM88BA6NKF7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 Y_RNA.2-201ENST00000362330 96 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 RNU6-490P-201ENST00000362985 107 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 NDUFB4P7-201ENST00000423198 363 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 MTCYBP10-201ENST00000424905 650 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 RPS29P7-201ENST00000439662 171 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AL133547.1-201ENST00000448546 220 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 PCMTD1P1-201ENST00000455560 355 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 SNORA59A-201ENST00000459326 152 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 DEFB109F-201ENST00000491870 277 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AC092436.3-201ENST00000511788 257 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 SNORA31.8-201ENST00000516327 108 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 SNORA74D-201ENST00000516404 141 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 MIR892C-201ENST00000516410 77 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 RNU6-1256P-201ENST00000516539 103 ntBASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TMEM88BA6NKF7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TMEM88BA6NKF7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
TMEM88BA6NKF7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
TMEM88BA6NKF7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AC138393.1-203ENST00000327086 343 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.144-201ENST00000363521 113 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.252-201ENST00000364556 101 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.324-201ENST00000365165 102 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 U3.32-201ENST00000408116 212 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AL158156.1-201ENST00000422509 473 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 RN7SL517P-201ENST00000462240 305 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.661-201ENST00000516003 99 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 RNA5SP290-201ENST00000517133 127 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AF186190.1-201ENST00000517470 480 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AC007179.3-201ENST00000604976 235 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 AC015871.5-202ENST00000623252 701 ntBASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms