Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 FAM197Y1-201ENST00000421178 764 ntBASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
PPARGC1BQ86YN6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 ANKRD18DP-204ENST00000455355 1975 ntBASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 UBE2SP1-201ENST00000450587 669 ntBASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 CR392000.1-201ENST00000624770 1228 ntBASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC30.12■■■□□ 2.41
PPARGC1BQ86YN6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC30.11■■■□□ 2.41
PPARGC1BQ86YN6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 AC008550.1-201ENST00000511500 884 ntBASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC30.1■■■□□ 2.41
PPARGC1BQ86YN6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 AC120498.9-201ENST00000339021 3867 ntBASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PPARGC1BQ86YN6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PPARGC1BQ86YN6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms