Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ndufa4Q62425 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa4Q62425 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ndufa4Q62425 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.81■□□□□ 0.28
Ndufa4Q62425 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndufa4Q62425 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.8■□□□□ 0.28
Ndufa4Q62425 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa4Q62425 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa4Q62425 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ndufa4Q62425 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ndufa4Q62425 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa4Q62425 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufa4Q62425 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa4Q62425 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa4Q62425 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa4Q62425 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufa4Q62425 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa4Q62425 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa4Q62425 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufa4Q62425 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ndufa4Q62425 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ndufa4Q62425 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ndufa4Q62425 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufa4Q62425 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.76■□□□□ 0.27
Ndufa4Q62425 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufa4Q62425 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufa4Q62425 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufa4Q62425 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ndufa4Q62425 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufa4Q62425 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.75■□□□□ 0.27
Ndufa4Q62425 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.74■□□□□ 0.27
Ndufa4Q62425 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufa4Q62425 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufa4Q62425 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufa4Q62425 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufa4Q62425 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufa4Q62425 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.73■□□□□ 0.27
Ndufa4Q62425 Gm8109-201ENSMUST00000194076 746 ntBASIC16.73■□□□□ 0.27
Ndufa4Q62425 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufa4Q62425 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufa4Q62425 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufa4Q62425 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufa4Q62425 Gm16148-201ENSMUST00000119653 893 ntBASIC16.71■□□□□ 0.27
Ndufa4Q62425 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufa4Q62425 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufa4Q62425 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufa4Q62425 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.7■□□□□ 0.26
Ndufa4Q62425 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufa4Q62425 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufa4Q62425 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufa4Q62425 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndufa4Q62425 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndufa4Q62425 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndufa4Q62425 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ndufa4Q62425 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndufa4Q62425 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa4Q62425 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa4Q62425 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa4Q62425 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa4Q62425 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa4Q62425 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa4Q62425 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa4Q62425 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa4Q62425 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.67■□□□□ 0.26
Ndufa4Q62425 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.67■□□□□ 0.26
Ndufa4Q62425 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa4Q62425 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa4Q62425 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa4Q62425 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ndufa4Q62425 Particl-201ENSMUST00000205370 1560 ntBASIC16.65■□□□□ 0.26
Ndufa4Q62425 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa4Q62425 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
Ndufa4Q62425 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ndufa4Q62425 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa4Q62425 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa4Q62425 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa4Q62425 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ndufa4Q62425 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa4Q62425 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa4Q62425 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ndufa4Q62425 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms