Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 tL(UAA)NtL(UAA)N 84 nt9.42□□□□□ -0.9
SSF1P38789 THI6YPL214C 1623 nt9.42□□□□□ -0.9
SSF1P38789 YIL168WYIL168W 384 nt9.41□□□□□ -0.9
SSF1P38789 SCO2YBR024W 906 nt9.41□□□□□ -0.9
SSF1P38789 YHL030W-AYHL030W-A 462 nt9.4□□□□□ -0.9
SSF1P38789 YHR145CYHR145C 357 nt9.39□□□□□ -0.91
SSF1P38789 PRE10YOR362C 867 nt9.39□□□□□ -0.91
SSF1P38789 APM1YPL259C 1428 nt9.39□□□□□ -0.91
SSF1P38789 SNU71YGR013W 1863 nt9.38□□□□□ -0.91
SSF1P38789 EHT1YBR177C 1356 nt9.38□□□□□ -0.91
SSF1P38789 NBA1YOL070C 1506 nt9.38□□□□□ -0.91
SSF1P38789 YMR147WYMR147W 672 nt9.38□□□□□ -0.91
SSF1P38789 MAE1YKL029C 2010 nt9.38□□□□□ -0.91
SSF1P38789 TOS1YBR162C 1368 nt9.37□□□□□ -0.91
SSF1P38789 LRO1YNR008W 1986 nt9.37□□□□□ -0.91
SSF1P38789 PMU1YKL128C 888 nt9.37□□□□□ -0.91
SSF1P38789 RCF1YML030W 480 nt9.37□□□□□ -0.91
SSF1P38789 JHD1YER051W 1479 nt9.35□□□□□ -0.91
SSF1P38789 INO1YJL153C 1602 nt9.35□□□□□ -0.91
SSF1P38789 FET5YFL041W 1869 nt9.35□□□□□ -0.91
SSF1P38789 KAE1YKR038C 1161 nt9.35□□□□□ -0.91
SSF1P38789 ADE1YAR015W 921 nt9.35□□□□□ -0.91
SSF1P38789 TIM50YPL063W 1431 nt9.35□□□□□ -0.91
SSF1P38789 YEL023CYEL023C 2049 nt9.34□□□□□ -0.91
SSF1P38789 HXT8YJL214W 1710 nt9.34□□□□□ -0.91
SSF1P38789 NDE2YDL085W 1638 nt9.34□□□□□ -0.91
SSF1P38789 YGR137WYGR137W 375 nt9.33□□□□□ -0.92
SSF1P38789 YJL043WYJL043W 774 nt9.33□□□□□ -0.92
SSF1P38789 UTP6YDR449C 1323 nt9.32□□□□□ -0.92
SSF1P38789 HXT11YOL156W 1704 nt9.32□□□□□ -0.92
SSF1P38789 HIS3YOR202W 663 nt9.32□□□□□ -0.92
SSF1P38789 NUP53YMR153W 1428 nt9.31□□□□□ -0.92
SSF1P38789 BUD31YCR063W 474 nt9.31□□□□□ -0.92
SSF1P38789 YLR072WYLR072W 2082 nt9.3□□□□□ -0.92
SSF1P38789 SIR2YDL042C 1689 nt9.3□□□□□ -0.92
SSF1P38789 LEA1YPL213W 717 nt9.29□□□□□ -0.92
SSF1P38789 RTG2YGL252C 1767 nt9.28□□□□□ -0.92
SSF1P38789 WSC3YOL105C 1671 nt9.28□□□□□ -0.92
SSF1P38789 SGV1YPR161C 1974 nt9.26□□□□□ -0.93
SSF1P38789 ORM1YGR038W 669 nt9.26□□□□□ -0.93
SSF1P38789 TDA4YJR116W 840 nt9.26□□□□□ -0.93
SSF1P38789 FUS3YBL016W 1062 nt9.26□□□□□ -0.93
SSF1P38789 YOR268CYOR268C 399 nt9.26□□□□□ -0.93
SSF1P38789 PET494YNR045W 1470 nt9.26□□□□□ -0.93
SSF1P38789 ABP1YCR088W 1779 nt9.25□□□□□ -0.93
SSF1P38789 DIP5YPL265W 1827 nt9.25□□□□□ -0.93
SSF1P38789 YHL008CYHL008C 1884 nt9.25□□□□□ -0.93
SSF1P38789 PSP2YML017W 1782 nt9.24□□□□□ -0.93
SSF1P38789 SRM1YGL097W 1449 nt9.24□□□□□ -0.93
SSF1P38789 EDC2YER035W 438 nt9.24□□□□□ -0.93
SSF1P38789 ARG7YMR062C 1326 nt9.24□□□□□ -0.93
SSF1P38789 TGL5YOR081C 2250 nt9.23□□□□□ -0.93
SSF1P38789 YDR476CYDR476C 675 nt9.23□□□□□ -0.93
SSF1P38789 BMT5YIL096C 1011 nt9.23□□□□□ -0.93
SSF1P38789 HAC1YFL031W 717 nt9.22□□□□□ -0.93
SSF1P38789 YJL107CYJL107C 1164 nt9.22□□□□□ -0.93
SSF1P38789 MRP7YNL005C 1116 nt9.22□□□□□ -0.93
SSF1P38789 GCD11YER025W 1584 nt9.21□□□□□ -0.93
SSF1P38789 tD(GUC)BtD(GUC)B 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)DtD(GUC)D 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)G1tD(GUC)G1 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)G2tD(GUC)G2 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)I1tD(GUC)I1 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)I2tD(GUC)I2 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)J1tD(GUC)J1 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)J2tD(GUC)J2 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)J3tD(GUC)J3 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)J4tD(GUC)J4 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)KtD(GUC)K 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)L1tD(GUC)L1 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)L2tD(GUC)L2 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)MtD(GUC)M 72 nt9.21□□□□□ -0.94
SSF1P38789 tD(GUC)OtD(GUC)O 72 nt9.21□□□□□ -0.94
SSF1P38789 INM1YHR046C 888 nt9.21□□□□□ -0.94
SSF1P38789 APT1YML022W 564 nt9.21□□□□□ -0.94
SSF1P38789 YNL140CYNL140C 570 nt9.21□□□□□ -0.94
SSF1P38789 MAM3YOL060C 2121 nt9.21□□□□□ -0.94
SSF1P38789 ALG7YBR243C 1347 nt9.21□□□□□ -0.94
SSF1P38789 RSM23YGL129C 1353 nt9.21□□□□□ -0.94
SSF1P38789 YRF1-3YGR296W 5580 nt9.2□□□□□ -0.94
SSF1P38789 YRF1-6YNL339C 5580 nt9.2□□□□□ -0.94
SSF1P38789 YRF1-7YPL283C 5580 nt9.2□□□□□ -0.94
SSF1P38789 ARO3YDR035W 1113 nt9.2□□□□□ -0.94
SSF1P38789 GLY1YEL046C 1164 nt9.2□□□□□ -0.94
SSF1P38789 RRT6YGL146C 936 nt9.2□□□□□ -0.94
SSF1P38789 OCA1YNL099C 717 nt9.2□□□□□ -0.94
SSF1P38789 MNN9YPL050C 1188 nt9.2□□□□□ -0.94
SSF1P38789 TOM71YHR117W 1920 nt9.2□□□□□ -0.94
SSF1P38789 INP54YOL065C 1155 nt9.19□□□□□ -0.94
SSF1P38789 SLD7YOR060C 774 nt9.19□□□□□ -0.94
SSF1P38789 SPR1YOR190W 1338 nt9.19□□□□□ -0.94
SSF1P38789 TIF3YPR163C 1311 nt9.19□□□□□ -0.94
SSF1P38789 PNS1YOR161C 1620 nt9.19□□□□□ -0.94
SSF1P38789 SNP1YIL061C 903 nt9.18□□□□□ -0.94
SSF1P38789 CPT1YNL130C 1182 nt9.17□□□□□ -0.94
SSF1P38789 CIT3YPR001W 1461 nt9.16□□□□□ -0.94
SSF1P38789 MRS3YJL133W 945 nt9.16□□□□□ -0.94
SSF1P38789 CWC25YNL245C 540 nt9.16□□□□□ -0.94
SSF1P38789 MRN1YPL184C 1839 nt9.15□□□□□ -0.94
SSF1P38789 SEM1YDR363W-A 270 nt9.15□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 59.3 ms