Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.77■■■□□ 2.36
ALDH1A1P00352 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
ALDH1A1P00352 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ALDH1A1P00352 AC129492.7-201ENST00000622992 756 ntBASIC29.76■■■□□ 2.35
ALDH1A1P00352 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ALDH1A1P00352 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
ALDH1A1P00352 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ALDH1A1P00352 AC127502.1-201ENST00000399971 1502 ntBASIC29.75■■■□□ 2.35
ALDH1A1P00352 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ALDH1A1P00352 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
ALDH1A1P00352 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
ALDH1A1P00352 AC019069.1-201ENST00000610008 1333 ntBASIC29.73■■■□□ 2.35
ALDH1A1P00352 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ALDH1A1P00352 AL592295.1-201ENST00000400984 884 ntBASIC29.73■■■□□ 2.35
ALDH1A1P00352 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ALDH1A1P00352 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ALDH1A1P00352 AL451085.2-201ENST00000605085 799 ntBASIC29.72■■■□□ 2.35
ALDH1A1P00352 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
ALDH1A1P00352 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
ALDH1A1P00352 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.7■■■□□ 2.35
ALDH1A1P00352 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
ALDH1A1P00352 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ALDH1A1P00352 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.69■■■□□ 2.34
ALDH1A1P00352 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.69■■■□□ 2.34
ALDH1A1P00352 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
ALDH1A1P00352 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ALDH1A1P00352 DUX4L18-201ENST00000553347 1267 ntBASIC29.68■■■□□ 2.34
ALDH1A1P00352 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ALDH1A1P00352 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.67■■■□□ 2.34
ALDH1A1P00352 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
ALDH1A1P00352 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
ALDH1A1P00352 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.66■■■□□ 2.34
ALDH1A1P00352 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ALDH1A1P00352 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ALDH1A1P00352 AC007029.1-201ENST00000604183 313 ntBASIC29.65■■■□□ 2.34
ALDH1A1P00352 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.65■■■□□ 2.34
ALDH1A1P00352 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ALDH1A1P00352 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
ALDH1A1P00352 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC29.64■■■□□ 2.34
ALDH1A1P00352 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.64■■■□□ 2.34
ALDH1A1P00352 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.64■■■□□ 2.34
ALDH1A1P00352 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
ALDH1A1P00352 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.63■■■□□ 2.33
ALDH1A1P00352 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ALDH1A1P00352 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ALDH1A1P00352 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.63■■■□□ 2.33
ALDH1A1P00352 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.63■■■□□ 2.33
ALDH1A1P00352 AL592293.1-201ENST00000502889 1188 ntBASIC29.63■■■□□ 2.33
ALDH1A1P00352 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ALDH1A1P00352 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.62■■■□□ 2.33
ALDH1A1P00352 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.62■■■□□ 2.33
ALDH1A1P00352 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
ALDH1A1P00352 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.62■■■□□ 2.33
ALDH1A1P00352 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.62■■■□□ 2.33
ALDH1A1P00352 AC133552.2-201ENST00000619106 1032 ntBASIC29.62■■■□□ 2.33
ALDH1A1P00352 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ALDH1A1P00352 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ALDH1A1P00352 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ALDH1A1P00352 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ALDH1A1P00352 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ALDH1A1P00352 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ALDH1A1P00352 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ALDH1A1P00352 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ALDH1A1P00352 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ALDH1A1P00352 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC29.59■■■□□ 2.33
ALDH1A1P00352 AL157400.5-201ENST00000507624 621 ntBASIC29.59■■■□□ 2.33
ALDH1A1P00352 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.59■■■□□ 2.33
ALDH1A1P00352 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ALDH1A1P00352 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.58■■■□□ 2.33
ALDH1A1P00352 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
ALDH1A1P00352 AC009831.1-201ENST00000580420 1582 ntBASIC29.58■■■□□ 2.33
ALDH1A1P00352 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
ALDH1A1P00352 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ALDH1A1P00352 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ALDH1A1P00352 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.56■■■□□ 2.32
ALDH1A1P00352 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.56■■■□□ 2.32
ALDH1A1P00352 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ALDH1A1P00352 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.56■■■□□ 2.32
ALDH1A1P00352 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
ALDH1A1P00352 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ALDH1A1P00352 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
ALDH1A1P00352 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ALDH1A1P00352 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ALDH1A1P00352 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
ALDH1A1P00352 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
ALDH1A1P00352 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.52■■■□□ 2.32
ALDH1A1P00352 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ALDH1A1P00352 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.5■■■□□ 2.31
ALDH1A1P00352 AC074183.2-201ENST00000623112 922 ntBASIC29.5■■■□□ 2.31
ALDH1A1P00352 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ALDH1A1P00352 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.49■■■□□ 2.31
ALDH1A1P00352 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
ALDH1A1P00352 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ALDH1A1P00352 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms