Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Trav4-2A0A075B638 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-2A0A075B638 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trav4-2A0A075B638 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-2A0A075B638 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-2A0A075B638 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-2A0A075B638 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Trav4-2A0A075B638 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-2A0A075B638 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-2A0A075B638 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-2A0A075B638 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav4-2A0A075B638 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav4-2A0A075B638 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-2A0A075B638 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-2A0A075B638 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trav4-2A0A075B638 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.39■□□□□ 0.53
Trav4-2A0A075B638 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-2A0A075B638 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav4-2A0A075B638 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav4-2A0A075B638 Particl-201ENSMUST00000205370 1560 ntBASIC18.38■□□□□ 0.53
Trav4-2A0A075B638 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-2A0A075B638 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-2A0A075B638 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trav4-2A0A075B638 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-2A0A075B638 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trav4-2A0A075B638 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trav4-2A0A075B638 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav4-2A0A075B638 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav4-2A0A075B638 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav4-2A0A075B638 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav4-2A0A075B638 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav4-2A0A075B638 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav4-2A0A075B638 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav4-2A0A075B638 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav4-2A0A075B638 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav4-2A0A075B638 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-2A0A075B638 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav4-2A0A075B638 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4-2A0A075B638 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Trav4-2A0A075B638 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav4-2A0A075B638 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-2A0A075B638 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav4-2A0A075B638 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-2A0A075B638 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-2A0A075B638 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav4-2A0A075B638 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Trav4-2A0A075B638 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav4-2A0A075B638 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav4-2A0A075B638 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav4-2A0A075B638 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-2A0A075B638 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-2A0A075B638 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-2A0A075B638 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav4-2A0A075B638 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.27■□□□□ 0.51
Trav4-2A0A075B638 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms