Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
COL1A2P08123 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 CR769767.2-201ENST00000622735 460 ntBASIC21.03■□□□□ 0.96
COL1A2P08123 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL1A2P08123 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
COL1A2P08123 KRT8P3-201ENST00000519669 1449 ntBASIC21.02■□□□□ 0.96
COL1A2P08123 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
COL1A2P08123 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
COL1A2P08123 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.02■□□□□ 0.96
COL1A2P08123 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.02■□□□□ 0.96
COL1A2P08123 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.02■□□□□ 0.96
COL1A2P08123 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL1A2P08123 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.02■□□□□ 0.95
COL1A2P08123 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.02■□□□□ 0.95
COL1A2P08123 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL1A2P08123 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL1A2P08123 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL1A2P08123 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.01■□□□□ 0.95
COL1A2P08123 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL1A2P08123 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.01■□□□□ 0.95
COL1A2P08123 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.01■□□□□ 0.95
COL1A2P08123 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL1A2P08123 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 AL031133.1-201ENST00000406807 723 ntBASIC21■□□□□ 0.95
COL1A2P08123 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21■□□□□ 0.95
COL1A2P08123 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21■□□□□ 0.95
COL1A2P08123 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
COL1A2P08123 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21■□□□□ 0.95
COL1A2P08123 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 TEX21P-204ENST00000641479 1693 ntBASIC21■□□□□ 0.95
COL1A2P08123 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL1A2P08123 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21■□□□□ 0.95
COL1A2P08123 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms