Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.91□□□□□ -1.62
EPHB3P54753 RPS26P40-201ENST00000435209 294 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC092013.1-201ENST00000438795 332 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 HSPE1P28-201ENST00000443139 211 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.91□□□□□ -1.62
EPHB3P54753 AC093840.1-201ENST00000511599 336 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 NARSP2-201ENST00000518524 679 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 SUMO2P20-201ENST00000520803 283 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.91□□□□□ -1.62
EPHB3P54753 APOOP3-201ENST00000536787 586 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.91□□□□□ -1.62
EPHB3P54753 NCAPGP2-201ENST00000557911 754 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC026470.2-201ENST00000561492 181 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC084783.1-201ENST00000565846 910 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 LARP7P2-201ENST00000575306 125 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.91□□□□□ -1.62
EPHB3P54753 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.91□□□□□ -1.62
EPHB3P54753 AC005191.1-201ENST00000603950 358 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AC245389.1-201ENST00000605141 529 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AP004289.2-201ENST00000444413 1457 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
EPHB3P54753 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EPHB3P54753 AC092376.2-201ENST00000622621 4116 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
EPHB3P54753 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.91□□□□□ -1.62
EPHB3P54753 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
EPHB3P54753 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
EPHB3P54753 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
EPHB3P54753 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EPHB3P54753 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
EPHB3P54753 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
EPHB3P54753 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
EPHB3P54753 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
EPHB3P54753 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
EPHB3P54753 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.9□□□□□ -1.62
EPHB3P54753 AP000756.2-201ENST00000624168 2567 ntBASIC4.9□□□□□ -1.62
EPHB3P54753 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
EPHB3P54753 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.9□□□□□ -1.62
EPHB3P54753 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
EPHB3P54753 RNU6-522P-201ENST00000364497 107 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 SNORD37.1-201ENST00000390968 65 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.9□□□□□ -1.63
EPHB3P54753 RPL6P29-201ENST00000414863 865 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AL591212.2-201ENST00000433923 257 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.9□□□□□ -1.63
EPHB3P54753 MTCO3P2-201ENST00000457365 171 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 PABPC1P3-201ENST00000469174 459 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AC023424.1-201ENST00000496058 459 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AC091885.1-201ENST00000506658 268 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AC017037.2-201ENST00000513850 890 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 RNU6-864P-201ENST00000516256 108 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.9□□□□□ -1.63
EPHB3P54753 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.9□□□□□ -1.63
EPHB3P54753 FKBP1BP1-201ENST00000553366 325 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 PARP1P2-201ENST00000556806 195 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AC105129.1-201ENST00000560250 297 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.9□□□□□ -1.63
EPHB3P54753 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.9□□□□□ -1.63
EPHB3P54753 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.9□□□□□ -1.63
EPHB3P54753 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
EPHB3P54753 PSMA6P4-201ENST00000603247 718 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 U4.1-201ENST00000620349 87 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.9□□□□□ -1.63
EPHB3P54753 AC004972.1-201ENST00000623934 2209 ntBASIC4.9□□□□□ -1.63
EPHB3P54753 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
EPHB3P54753 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
EPHB3P54753 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.9□□□□□ -1.63
EPHB3P54753 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
EPHB3P54753 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
EPHB3P54753 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
EPHB3P54753 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
EPHB3P54753 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
EPHB3P54753 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
EPHB3P54753 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.89□□□□□ -1.63
EPHB3P54753 AP001350.1-201ENST00000601906 1524 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.89□□□□□ -1.63
EPHB3P54753 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EPHB3P54753 SNORA70.2-201ENST00000364506 135 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RNY4P16-201ENST00000364768 94 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHB3P54753 CISD1P1-201ENST00000393907 327 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RPL31P52-201ENST00000407532 367 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 MIR548K-201ENST00000408406 116 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RNU6-847P-201ENST00000411115 108 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 PRELID3BP11-201ENST00000414230 479 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AC104333.2-201ENST00000422630 192 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RPL12P34-201ENST00000424532 479 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AC137499.1-201ENST00000427602 88 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RPL34P6-201ENST00000432390 345 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AL031663.1-201ENST00000437445 219 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.89□□□□□ -1.63
EPHB3P54753 HMGB3P22-202ENST00000451823 572 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 CECR9-201ENST00000453421 199 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 BTF3P15-201ENST00000455606 336 ntBASIC4.89□□□□□ -1.63
EPHB3P54753 RPL21P99-201ENST00000480369 423 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms