Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 CEACAMP10-202ENST00000495431 496 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AC135721.1-201ENST00000497954 479 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 RNA5SP384-201ENST00000516615 116 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 RNU6-307P-201ENST00000516743 106 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 SCARNA20.4-201ENST00000516969 131 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.53□□□□□ -1.52
NFKB1P19838 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 AC124068.1-201ENST00000563131 678 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.53□□□□□ -1.52
NFKB1P19838 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 MIR3614-201ENST00000581261 86 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 MIR7853-201ENST00000584820 132 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AC011494.1-201ENST00000596454 237 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.53□□□□□ -1.52
NFKB1P19838 AL138889.2-201ENST00000603883 242 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.53□□□□□ -1.52
NFKB1P19838 RNA5SP440-201ENST00000612665 119 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 MIR6864-201ENST00000617935 70 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
NFKB1P19838 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
NFKB1P19838 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 AC109446.4-201ENST00000623235 2755 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NFKB1P19838 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.53□□□□□ -1.52
NFKB1P19838 AP005432.1-201ENST00000580891 3485 ntBASIC5.53□□□□□ -1.52
NFKB1P19838 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
NFKB1P19838 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NFKB1P19838 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.52□□□□□ -1.53
NFKB1P19838 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NFKB1P19838 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NFKB1P19838 SNORD62.1-201ENST00000362541 86 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 Y_RNA.39-201ENST00000362620 98 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 Y_RNA.106-201ENST00000363189 100 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 RNU6-1284P-201ENST00000363701 100 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 RN7SKP269-201ENST00000365545 319 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 Y_RNA.485-201ENST00000384395 102 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 MIR323B-201ENST00000385269 82 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 ADAM24P-201ENST00000398655 2101 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 RNU6-516P-201ENST00000411381 104 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 GPS2P1-201ENST00000411761 986 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.52□□□□□ -1.53
NFKB1P19838 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.52□□□□□ -1.53
NFKB1P19838 FAR2P4-202ENST00000425399 584 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 RPL12P17-201ENST00000432393 498 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.52□□□□□ -1.53
NFKB1P19838 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.52□□□□□ -1.53
NFKB1P19838 PPIAP3-201ENST00000450588 505 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AL354710.1-201ENST00000453641 246 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.52□□□□□ -1.53
NFKB1P19838 AC018638.3-201ENST00000461273 132 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AC022034.3-201ENST00000471393 478 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AC117503.1-201ENST00000472241 394 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 DEFB109F-201ENST00000491870 277 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AC009901.1-201ENST00000506703 541 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.52□□□□□ -1.53
NFKB1P19838 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.52□□□□□ -1.53
NFKB1P19838 FO393422.1-201ENST00000603908 708 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AC013244.1-201ENST00000604279 193 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 AC141273.2-201ENST00000618989 130 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.52□□□□□ -1.53
NFKB1P19838 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NFKB1P19838 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.51□□□□□ -1.53
NFKB1P19838 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NFKB1P19838 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
NFKB1P19838 XIAPP3-201ENST00000312918 795 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 RNA5SP234-201ENST00000363916 119 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 Y_RNA.210-201ENST00000364161 110 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 RN7SKP15-201ENST00000364742 309 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NFKB1P19838 Y_RNA.424-201ENST00000384063 103 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 RNU6-713P-201ENST00000384761 107 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 U3.29-201ENST00000391296 212 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NFKB1P19838 SNORA11B-201ENST00000408175 129 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 PGBD4P6-201ENST00000421501 610 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 SRSF1P1-201ENST00000424058 520 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 VTI1BP4-201ENST00000427516 527 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 AC099799.1-201ENST00000439809 192 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 DYNLT3P2-201ENST00000442517 295 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.51□□□□□ -1.53
NFKB1P19838 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.51□□□□□ -1.53
NFKB1P19838 OR1H1P-201ENST00000448731 937 ntBASIC5.51□□□□□ -1.53
NFKB1P19838 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.51□□□□□ -1.53
NFKB1P19838 AC092754.1-201ENST00000472975 479 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms