Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.459-201ENST00000384251 102 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 MIR141-201ENST00000384975 95 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 RPL32P23-201ENST00000397237 405 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 RNU2-62P-201ENST00000410868 191 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 RNU6-1148P-201ENST00000410992 104 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC127391.1-201ENST00000411737 98 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 TBCAP2-201ENST00000416175 326 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 BX510359.2-201ENST00000417920 305 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.15□□□□□ -1.59
EPHB3P54753 IFNA20P-201ENST00000436840 528 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 HMGB1P18-201ENST00000438801 619 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC009220.1-201ENST00000451614 275 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.15□□□□□ -1.59
EPHB3P54753 MTCO2P29-201ENST00000465212 189 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 RPL21P71-201ENST00000465598 459 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 RPS3AP50-201ENST00000487064 803 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC090096.1-201ENST00000489168 390 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
EPHB3P54753 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.15□□□□□ -1.59
EPHB3P54753 AC034159.1-201ENST00000513885 583 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.15□□□□□ -1.59
EPHB3P54753 RNU6-1046P-201ENST00000516538 107 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.15□□□□□ -1.59
EPHB3P54753 PDCD5P1-201ENST00000543528 309 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.15□□□□□ -1.59
EPHB3P54753 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.15□□□□□ -1.59
EPHB3P54753 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.15□□□□□ -1.59
EPHB3P54753 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.15□□□□□ -1.59
EPHB3P54753 AC078899.5-201ENST00000612475 178 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AL133173.2-201ENST00000614270 90 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 AC009161.2-201ENST00000624626 138 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.15□□□□□ -1.59
EPHB3P54753 MIR7641-1-201ENST00000627518 61 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.15□□□□□ -1.59
EPHB3P54753 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.15□□□□□ -1.59
EPHB3P54753 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.15□□□□□ -1.59
EPHB3P54753 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
EPHB3P54753 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 AC027228.2-201ENST00000567141 2154 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
EPHB3P54753 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 RNA5SP505-201ENST00000364748 108 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
EPHB3P54753 Y_RNA.579-201ENST00000390939 94 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.14□□□□□ -1.59
EPHB3P54753 SRIP2-201ENST00000428470 166 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 AL590639.1-201ENST00000456484 337 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 RPS5P7-201ENST00000456664 608 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.14□□□□□ -1.59
EPHB3P54753 MRPS17P3-201ENST00000465453 385 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 RN7SL860P-201ENST00000473738 223 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.14□□□□□ -1.59
EPHB3P54753 AC017037.1-201ENST00000508460 471 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 KLHL2P1-201ENST00000508691 521 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 RNA5SP401-201ENST00000515920 127 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 FTH1P11-201ENST00000517577 551 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 RAB9BP1-201ENST00000519581 626 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.14□□□□□ -1.59
EPHB3P54753 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.14□□□□□ -1.59
EPHB3P54753 SCOCP1-201ENST00000554676 349 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 MIR4742-201ENST00000581069 85 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.14□□□□□ -1.59
EPHB3P54753 AC010591.1-201ENST00000603941 649 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 AC104237.2-201ENST00000612456 443 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
EPHB3P54753 AC090617.10-201ENST00000624308 134 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.14□□□□□ -1.59
EPHB3P54753 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 OR9K1P-202ENST00000641111 3217 ntBASIC5.14□□□□□ -1.59
EPHB3P54753 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
EPHB3P54753 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
EPHB3P54753 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.13□□□□□ -1.59
EPHB3P54753 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms