Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST4Q8NFU0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 AL031963.3-201ENST00000606441 850 ntBASIC16.61■□□□□ 0.25
BEST4Q8NFU0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST4Q8NFU0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 KRT19P1-201ENST00000405746 1186 ntBASIC16.6■□□□□ 0.25
BEST4Q8NFU0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 UBE2DNL-204ENST00000602536 740 ntBASIC16.6■□□□□ 0.25
BEST4Q8NFU0 AL591742.1-201ENST00000604433 565 ntBASIC16.6■□□□□ 0.25
BEST4Q8NFU0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 KRT8P20-201ENST00000423953 1409 ntBASIC16.6■□□□□ 0.25
BEST4Q8NFU0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BEST4Q8NFU0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 YBX1P1-201ENST00000445822 960 ntBASIC16.59■□□□□ 0.25
BEST4Q8NFU0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 KRT18P14-201ENST00000534205 1250 ntBASIC16.59■□□□□ 0.25
BEST4Q8NFU0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST4Q8NFU0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 1289.7 ms