Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC073488.9-201ENST00000631601 754 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 CYP3A51P-201ENST00000633513 256 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 AC078880.4-201ENST00000617627 1749 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 LPAL2-203ENST00000454031 2498 ntBASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB9Q9Y5E1 MTND4P1-201ENST00000457501 1466 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC023245.2-201ENST00000530760 2978 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC092724.1-201ENST00000624623 3397 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 Y_RNA.193-201ENST00000363979 102 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 MIR558-201ENST00000384920 94 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC074085.1-201ENST00000413598 418 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AL731563.1-201ENST00000442202 214 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 PRPS1P1-201ENST00000445305 876 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AL133244.1-201ENST00000456007 258 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC126389.1-201ENST00000477436 290 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 HSD3BP3-201ENST00000514706 994 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AP005119.1-201ENST00000580956 292 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AL589743.6-201ENST00000611025 117 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 RMST_9.1-201ENST00000619945 193 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC099494.2-201ENST00000623371 978 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 SNX18P10-201ENST00000625014 519 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 AC009120.2-204ENST00000621548 2032 ntBASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
PCDHB9Q9Y5E1 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 MAPK10-323ENST00000641493 3207 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 HSPA8P14-201ENST00000552265 1805 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 AC011460.1-201ENST00000636268 1834 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RNA5SP512-201ENST00000364550 120 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RNU6-505P-201ENST00000384427 107 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 MT-TG-201ENST00000387429 68 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 U3.20-201ENST00000390909 217 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 MIR548F4-201ENST00000408515 105 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RPL37P10-201ENST00000412884 288 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 AL713922.1-201ENST00000416477 747 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RPL31P45-201ENST00000419532 356 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RPL36P19-201ENST00000430744 301 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 HMGB3P11-201ENST00000440127 604 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RPS29P15-201ENST00000458329 171 ntBASIC6.65□□□□□ -1.34
PCDHB9Q9Y5E1 RN7SL552P-201ENST00000462094 276 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms