Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 AP002982.1-201ENST00000492365 877 ntBASIC16.9■□□□□ 0.3
CDH20Q9HBT6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 HTR7P1-201ENST00000538670 1336 ntBASIC16.9■□□□□ 0.3
CDH20Q9HBT6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH20Q9HBT6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH20Q9HBT6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.89■□□□□ 0.3
CDH20Q9HBT6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH20Q9HBT6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.89■□□□□ 0.3
CDH20Q9HBT6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 AL353807.1-201ENST00000427475 662 ntBASIC16.89■□□□□ 0.29
CDH20Q9HBT6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 C1QL1P1-201ENST00000568105 661 ntBASIC16.89■□□□□ 0.29
CDH20Q9HBT6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 AP006294.2-201ENST00000641667 209 ntBASIC16.89■□□□□ 0.29
CDH20Q9HBT6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH20Q9HBT6 AL135905.2-201ENST00000584934 1404 ntBASIC16.88■□□□□ 0.29
CDH20Q9HBT6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH20Q9HBT6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms