Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 ZNF815P-204ENST00000434898 1737 ntBASIC18.68■□□□□ 0.58
KRT78Q8N1N4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
KRT78Q8N1N4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.68■□□□□ 0.58
KRT78Q8N1N4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT78Q8N1N4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 AC133681.1-201ENST00000465482 601 ntBASIC18.66■□□□□ 0.58
KRT78Q8N1N4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT78Q8N1N4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 KRT16P5-201ENST00000455284 522 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AC124016.1-201ENST00000609552 612 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AC110285.5-201ENST00000611501 352 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AC005332.7-201ENST00000614046 2005 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AC007952.6-201ENST00000573168 2673 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 AC003957.1-201ENST00000625108 2673 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 Z82202.1-201ENST00000623446 1880 ntBASIC18.65■□□□□ 0.58
KRT78Q8N1N4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT78Q8N1N4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT78Q8N1N4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
KRT78Q8N1N4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT78Q8N1N4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT78Q8N1N4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms