Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.25■□□□□ 0.99
COL1A2P08123 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.24■□□□□ 0.99
COL1A2P08123 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL1A2P08123 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
COL1A2P08123 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.24■□□□□ 0.99
COL1A2P08123 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.24■□□□□ 0.99
COL1A2P08123 TSPY21P-201ENST00000433481 731 ntBASIC21.24■□□□□ 0.99
COL1A2P08123 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A2P08123 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.24■□□□□ 0.99
COL1A2P08123 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A2P08123 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.24■□□□□ 0.99
COL1A2P08123 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL1A2P08123 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL1A2P08123 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.24■□□□□ 0.99
COL1A2P08123 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL1A2P08123 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.23■□□□□ 0.99
COL1A2P08123 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
COL1A2P08123 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
COL1A2P08123 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL1A2P08123 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
COL1A2P08123 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.23■□□□□ 0.99
COL1A2P08123 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.23■□□□□ 0.99
COL1A2P08123 AP003041.3-201ENST00000527151 707 ntBASIC21.23■□□□□ 0.99
COL1A2P08123 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A2P08123 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.22■□□□□ 0.99
COL1A2P08123 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
COL1A2P08123 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.22■□□□□ 0.99
COL1A2P08123 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.22■□□□□ 0.99
COL1A2P08123 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.22■□□□□ 0.99
COL1A2P08123 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.22■□□□□ 0.99
COL1A2P08123 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A2P08123 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.21■□□□□ 0.99
COL1A2P08123 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL1A2P08123 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
COL1A2P08123 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A2P08123 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A2P08123 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL1A2P08123 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 TSPY23P-201ENST00000440136 739 ntBASIC21.21■□□□□ 0.99
COL1A2P08123 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL1A2P08123 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A2P08123 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A2P08123 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms