Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SH3TC1Q8TE82 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 LINC01238-205ENST00000567549 1107 ntBASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SH3TC1Q8TE82 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 RNF152P1-201ENST00000397754 604 ntBASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 YBX1P2-201ENST00000489612 999 ntBASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.17■■□□□ 1.46
SH3TC1Q8TE82 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 FAM8A6P-201ENST00000407496 1135 ntBASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 AC141257.4-201ENST00000634557 245 ntBASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 AC136944.6-201ENST00000634818 245 ntBASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3TC1Q8TE82 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 COX11P1-201ENST00000489116 835 ntBASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.15■■□□□ 1.46
SH3TC1Q8TE82 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 MYC-208ENST00000641036 567 ntBASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.14■■□□□ 1.46
SH3TC1Q8TE82 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.14■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms