Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH20Q9HBT6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 GCSHP5-201ENST00000443090 522 ntBASIC16.97■□□□□ 0.31
CDH20Q9HBT6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH20Q9HBT6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 KRT16P5-201ENST00000455284 522 ntBASIC16.96■□□□□ 0.31
CDH20Q9HBT6 AC098590.1-201ENST00000468126 897 ntBASIC16.96■□□□□ 0.31
CDH20Q9HBT6 KRT18P16-201ENST00000510337 1294 ntBASIC16.96■□□□□ 0.31
CDH20Q9HBT6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH20Q9HBT6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CDH20Q9HBT6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH20Q9HBT6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH20Q9HBT6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms