Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 CDV3P1-201ENST00000471403 739 ntBASIC16.78■□□□□ 0.28
BEST4Q8NFU0 SUDS3P1-201ENST00000505831 966 ntBASIC16.78■□□□□ 0.28
BEST4Q8NFU0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST4Q8NFU0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 AC027612.3-201ENST00000413684 1047 ntBASIC16.77■□□□□ 0.28
BEST4Q8NFU0 AC097381.1-201ENST00000429019 1296 ntBASIC16.77■□□□□ 0.28
BEST4Q8NFU0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST4Q8NFU0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST4Q8NFU0 AC009237.14-201ENST00000609975 1594 ntBASIC16.77■□□□□ 0.27
BEST4Q8NFU0 LINC02228-203ENST00000641970 1355 ntBASIC16.77■□□□□ 0.27
BEST4Q8NFU0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST4Q8NFU0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 HTR7P1-202ENST00000624664 4411 ntBASIC16.75■□□□□ 0.27
BEST4Q8NFU0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 SLC7A5P1-201ENST00000568957 537 ntBASIC16.75■□□□□ 0.27
BEST4Q8NFU0 AL356652.1-201ENST00000615962 565 ntBASIC16.75■□□□□ 0.27
BEST4Q8NFU0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms