Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CKBP1-201ENST00000565489 1086 ntBASIC21.38■■□□□ 1.01
COL1A2P08123 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.38■■□□□ 1.01
COL1A2P08123 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.38■■□□□ 1.01
COL1A2P08123 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.38■■□□□ 1.01
COL1A2P08123 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL1A2P08123 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL1A2P08123 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.38■■□□□ 1.01
COL1A2P08123 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.38■■□□□ 1.01
COL1A2P08123 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL1A2P08123 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL1A2P08123 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.37■■□□□ 1.01
COL1A2P08123 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
COL1A2P08123 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 INGX-201ENST00000359239 846 ntBASIC21.37■■□□□ 1.01
COL1A2P08123 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
COL1A2P08123 HMGA1P5-201ENST00000412453 271 ntBASIC21.37■■□□□ 1.01
COL1A2P08123 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 AC010203.1-204ENST00000548782 407 ntBASIC21.37■■□□□ 1.01
COL1A2P08123 AC010653.2-201ENST00000623505 997 ntBASIC21.37■■□□□ 1.01
COL1A2P08123 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.37■■□□□ 1.01
COL1A2P08123 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.37■■□□□ 1.01
COL1A2P08123 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL1A2P08123 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.37■■□□□ 1.01
COL1A2P08123 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL1A2P08123 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
COL1A2P08123 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL1A2P08123 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.37■■□□□ 1.01
COL1A2P08123 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL1A2P08123 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 LIN28AP1-201ENST00000429574 405 ntBASIC21.36■■□□□ 1.01
COL1A2P08123 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.36■■□□□ 1.01
COL1A2P08123 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.36■■□□□ 1.01
COL1A2P08123 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.36■■□□□ 1.01
COL1A2P08123 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
COL1A2P08123 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.36■■□□□ 1.01
COL1A2P08123 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL1A2P08123 PRSS44-201ENST00000515154 1146 ntBASIC21.36■■□□□ 1.01
COL1A2P08123 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.36■■□□□ 1.01
COL1A2P08123 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.36■■□□□ 1.01
COL1A2P08123 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
COL1A2P08123 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.36■■□□□ 1.01
COL1A2P08123 AL023803.3-201ENST00000615559 522 ntBASIC21.36■■□□□ 1.01
COL1A2P08123 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL1A2P08123 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.35■■□□□ 1.01
COL1A2P08123 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.35■■□□□ 1.01
COL1A2P08123 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 AC092338.2-201ENST00000568827 1415 ntBASIC21.35■■□□□ 1.01
COL1A2P08123 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 AC007663.1-201ENST00000438948 1240 ntBASIC21.35■■□□□ 1.01
COL1A2P08123 TSPY17P-201ENST00000450329 467 ntBASIC21.35■■□□□ 1.01
COL1A2P08123 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.35■■□□□ 1.01
COL1A2P08123 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.35■■□□□ 1.01
COL1A2P08123 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.35■■□□□ 1.01
COL1A2P08123 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL1A2P08123 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A2P08123 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A2P08123 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL1A2P08123 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms