Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 PTC6YCR079W 1329 nt8.13□□□□□ -1.11
NPL3Q01560 MAK32YCR019W 1092 nt8.13□□□□□ -1.11
NPL3Q01560 RSM7YJR113C 744 nt8.13□□□□□ -1.11
NPL3Q01560 YKR023WYKR023W 1593 nt8.13□□□□□ -1.11
NPL3Q01560 ERO1YML130C 1692 nt8.12□□□□□ -1.11
NPL3Q01560 MDL2YPL270W 2322 nt8.11□□□□□ -1.11
NPL3Q01560 DPL1YDR294C 1770 nt8.11□□□□□ -1.11
NPL3Q01560 YDR467CYDR467C 327 nt8.1□□□□□ -1.11
NPL3Q01560 MIM1YOL026C 342 nt8.1□□□□□ -1.11 RIP-Chip
NPL3Q01560 TGA1tA(UGC)A 73 nt8.09□□□□□ -1.11
NPL3Q01560 tA(UGC)EtA(UGC)E 73 nt8.09□□□□□ -1.11
NPL3Q01560 tA(UGC)GtA(UGC)G 73 nt8.09□□□□□ -1.11
NPL3Q01560 tA(UGC)LtA(UGC)L 73 nt8.09□□□□□ -1.11
NPL3Q01560 tA(UGC)OtA(UGC)O 73 nt8.09□□□□□ -1.11
NPL3Q01560 GGA2YHR108W 1758 nt8.09□□□□□ -1.11
NPL3Q01560 AGP3YFL055W 1677 nt8.08□□□□□ -1.12
NPL3Q01560 YFR020WYFR020W 699 nt8.08□□□□□ -1.12
NPL3Q01560 YGR210CYGR210C 1236 nt8.08□□□□□ -1.12
NPL3Q01560 COX16YJL003W 357 nt8.08□□□□□ -1.12
NPL3Q01560 YMR007WYMR007W 381 nt8.08□□□□□ -1.12
NPL3Q01560 INH1YDL181W 258 nt8.07□□□□□ -1.12 RIP-Chip
NPL3Q01560 RPL12BYDR418W 498 nt8.07□□□□□ -1.12 RIP-Chip
NPL3Q01560 GPM1YKL152C 744 nt8.07□□□□□ -1.12
NPL3Q01560 YOR343CYOR343C 327 nt8.07□□□□□ -1.12
NPL3Q01560 FCY1YPR062W 477 nt8.07□□□□□ -1.12 RIP-Chip
NPL3Q01560 RCR1YBR005W 642 nt8.06□□□□□ -1.12 RIP-Chip
NPL3Q01560 LEU4YNL104C 1860 nt8.06□□□□□ -1.12
NPL3Q01560 MTO1YGL236C 2010 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)BtD(GUC)B 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)DtD(GUC)D 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)G1tD(GUC)G1 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)G2tD(GUC)G2 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)I1tD(GUC)I1 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)I2tD(GUC)I2 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)J1tD(GUC)J1 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)J2tD(GUC)J2 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)J3tD(GUC)J3 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)J4tD(GUC)J4 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)KtD(GUC)K 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)L1tD(GUC)L1 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)L2tD(GUC)L2 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)MtD(GUC)M 72 nt8.04□□□□□ -1.12
NPL3Q01560 tD(GUC)OtD(GUC)O 72 nt8.04□□□□□ -1.12
NPL3Q01560 NPL6YMR091C 1308 nt8.03□□□□□ -1.12
NPL3Q01560 MFG1YDL233W 1377 nt8.03□□□□□ -1.12 RIP-Chip
NPL3Q01560 UFD1YGR048W 1086 nt8.03□□□□□ -1.12
NPL3Q01560 YLR460CYLR460C 1131 nt8.03□□□□□ -1.12
NPL3Q01560 YMR316C-BYMR316C-B 309 nt8.03□□□□□ -1.12
NPL3Q01560 THI3YDL080C 1830 nt8.03□□□□□ -1.12
NPL3Q01560 EHD3YDR036C 1503 nt8.03□□□□□ -1.12
NPL3Q01560 BUR6YER159C 429 nt8.02□□□□□ -1.13 RIP-Chip
NPL3Q01560 YBL095WYBL095W 813 nt8.01□□□□□ -1.13
NPL3Q01560 YPL071CYPL071C 471 nt8.01□□□□□ -1.13 RIP-Chip
NPL3Q01560 YPL108WYPL108W 507 nt8.01□□□□□ -1.13
NPL3Q01560 ALR1YOL130W 2580 nt8.01□□□□□ -1.13
NPL3Q01560 YCR049CYCR049C 447 nt8□□□□□ -1.13
NPL3Q01560 YMC2YBR104W 990 nt8□□□□□ -1.13
NPL3Q01560 tE(CUC)DtE(CUC)D 72 nt7.99□□□□□ -1.13
NPL3Q01560 tE(CUC)ItE(CUC)I 72 nt7.99□□□□□ -1.13
NPL3Q01560 YMR166CYMR166C 1107 nt7.98□□□□□ -1.13 RIP-Chip
NPL3Q01560 YOR268CYOR268C 399 nt7.98□□□□□ -1.13
NPL3Q01560 ECM27YJR106W 2178 nt7.97□□□□□ -1.13
NPL3Q01560 CHS7YHR142W 951 nt7.97□□□□□ -1.13
NPL3Q01560 YAL016C-AYAL016C-A 315 nt7.97□□□□□ -1.13
NPL3Q01560 SRN2YLR119W 642 nt7.97□□□□□ -1.13 RIP-Chip
NPL3Q01560 AST1YBL069W 1290 nt7.96□□□□□ -1.14
NPL3Q01560 LSP1YPL004C 1026 nt7.96□□□□□ -1.14
NPL3Q01560 HBS1YKR084C 1836 nt7.95□□□□□ -1.14
NPL3Q01560 MRS4YKR052C 915 nt7.95□□□□□ -1.14 RIP-Chip
NPL3Q01560 OLA1YBR025C 1185 nt7.95□□□□□ -1.14
NPL3Q01560 HOS2YGL194C 1359 nt7.95□□□□□ -1.14
NPL3Q01560 YIR035CYIR035C 765 nt7.94□□□□□ -1.14 RIP-Chip
NPL3Q01560 SNU71YGR013W 1863 nt7.94□□□□□ -1.14
NPL3Q01560 FIT1YDR534C 1587 nt7.93□□□□□ -1.14
NPL3Q01560 TMS1YDR105C 1422 nt7.93□□□□□ -1.14
NPL3Q01560 NPP2YEL016C 1482 nt7.93□□□□□ -1.14
NPL3Q01560 EDC2YER035W 438 nt7.92□□□□□ -1.14
NPL3Q01560 YJL009WYJL009W 327 nt7.92□□□□□ -1.14
NPL3Q01560 CAK1YFL029C 1107 nt7.91□□□□□ -1.14 RIP-Chip
NPL3Q01560 YHR145CYHR145C 357 nt7.91□□□□□ -1.14
NPL3Q01560 YJR149WYJR149W 1215 nt7.91□□□□□ -1.14
NPL3Q01560 SCO2YBR024W 906 nt7.91□□□□□ -1.14
NPL3Q01560 TOS1YBR162C 1368 nt7.91□□□□□ -1.14
NPL3Q01560 OCH1YGL038C 1443 nt7.91□□□□□ -1.14
NPL3Q01560 UBP13YBL067C 2244 nt7.9□□□□□ -1.14
NPL3Q01560 LPD1YFL018C 1500 nt7.9□□□□□ -1.14
NPL3Q01560 YJL160CYJL160C 864 nt7.9□□□□□ -1.14
NPL3Q01560 HRA1HRA1 564 nt7.9□□□□□ -1.14
NPL3Q01560 BUB2YMR055C 921 nt7.9□□□□□ -1.14
NPL3Q01560 MET22YOL064C 1074 nt7.9□□□□□ -1.14
NPL3Q01560 RRT14YIL127C 621 nt7.89□□□□□ -1.15
NPL3Q01560 YIR018C-AYIR018C-A 138 nt7.89□□□□□ -1.15
NPL3Q01560 ORT1YOR130C 879 nt7.89□□□□□ -1.15 RIP-Chip
NPL3Q01560 YIL177CYIL177C 5277 nt7.88□□□□□ -1.15
NPL3Q01560 AAT1YKL106W 1356 nt7.88□□□□□ -1.15
NPL3Q01560 YMR147WYMR147W 672 nt7.88□□□□□ -1.15 RIP-Chip
NPL3Q01560 TPN1YGL186C 1740 nt7.88□□□□□ -1.15
NPL3Q01560 APM1YPL259C 1428 nt7.87□□□□□ -1.15
NPL3Q01560 EMC3YKL207W 762 nt7.87□□□□□ -1.15
NPL3Q01560 YMR206WYMR206W 942 nt7.87□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms