Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 tL(UAA)B1tL(UAA)B1 84 nt8.49□□□□□ -1.05
SCD6P45978 tL(UAA)B2tL(UAA)B2 84 nt8.49□□□□□ -1.05
SCD6P45978 tL(UAA)DtL(UAA)D 84 nt8.49□□□□□ -1.05
SCD6P45978 SUP51tL(UAA)J 84 nt8.49□□□□□ -1.05
SCD6P45978 tL(UAA)KtL(UAA)K 84 nt8.49□□□□□ -1.05
SCD6P45978 tL(UAA)LtL(UAA)L 84 nt8.49□□□□□ -1.05
SCD6P45978 tL(UAA)NtL(UAA)N 84 nt8.49□□□□□ -1.05
SCD6P45978 PUP3YER094C 618 nt8.47□□□□□ -1.05
SCD6P45978 TDH1YJL052W 999 nt8.47□□□□□ -1.05
SCD6P45978 AAT1YKL106W 1356 nt8.47□□□□□ -1.05
SCD6P45978 THI73YLR004C 1572 nt8.45□□□□□ -1.06
SCD6P45978 EDC2YER035W 438 nt8.45□□□□□ -1.06
SCD6P45978 snR86snR86 1004 nt8.44□□□□□ -1.06
SCD6P45978 PMU1YKL128C 888 nt8.43□□□□□ -1.06
SCD6P45978 ADE1YAR015W 921 nt8.42□□□□□ -1.06
SCD6P45978 YOR268CYOR268C 399 nt8.42□□□□□ -1.06
SCD6P45978 MTO1YGL236C 2010 nt8.41□□□□□ -1.06 RIP-Chip
SCD6P45978 SHC1YER096W 1539 nt8.41□□□□□ -1.06
SCD6P45978 NUP53YMR153W 1428 nt8.41□□□□□ -1.06 RIP-Chip
SCD6P45978 MEP1YGR121C 1479 nt8.4□□□□□ -1.06
SCD6P45978 PRE10YOR362C 867 nt8.4□□□□□ -1.06 RIP-Chip
SCD6P45978 TIM50YPL063W 1431 nt8.39□□□□□ -1.07
SCD6P45978 TOS1YBR162C 1368 nt8.39□□□□□ -1.07 RIP-Chip
SCD6P45978 EHT1YBR177C 1356 nt8.39□□□□□ -1.07
SCD6P45978 YIL168WYIL168W 384 nt8.38□□□□□ -1.07
SCD6P45978 YHL030W-AYHL030W-A 462 nt8.37□□□□□ -1.07
SCD6P45978 YJL043WYJL043W 774 nt8.37□□□□□ -1.07
SCD6P45978 FUS3YBL016W 1062 nt8.37□□□□□ -1.07
SCD6P45978 JHD1YER051W 1479 nt8.37□□□□□ -1.07
SCD6P45978 RCF1YML030W 480 nt8.36□□□□□ -1.07 RIP-Chip
SCD6P45978 LRO1YNR008W 1986 nt8.35□□□□□ -1.07 RIP-Chip
SCD6P45978 HEL2YDR266C 1920 nt8.35□□□□□ -1.07 RIP-Chip
SCD6P45978 KAE1YKR038C 1161 nt8.34□□□□□ -1.07 RIP-Chip
SCD6P45978 HXT8YJL214W 1710 nt8.33□□□□□ -1.08
SCD6P45978 THI6YPL214C 1623 nt8.32□□□□□ -1.08
SCD6P45978 PET494YNR045W 1470 nt8.32□□□□□ -1.08 RIP-Chip
SCD6P45978 TRP2YER090W 1524 nt8.32□□□□□ -1.08 RIP-Chip
SCD6P45978 NBA1YOL070C 1506 nt8.32□□□□□ -1.08
SCD6P45978 PSP2YML017W 1782 nt8.32□□□□□ -1.08
SCD6P45978 YLR072WYLR072W 2082 nt8.31□□□□□ -1.08 RIP-Chip
SCD6P45978 BUD31YCR063W 474 nt8.31□□□□□ -1.08
SCD6P45978 FET5YFL041W 1869 nt8.3□□□□□ -1.08 RIP-Chip
SCD6P45978 NDE2YDL085W 1638 nt8.3□□□□□ -1.08
SCD6P45978 YDR476CYDR476C 675 nt8.3□□□□□ -1.08
SCD6P45978 YGR137WYGR137W 375 nt8.29□□□□□ -1.08
SCD6P45978 HIS3YOR202W 663 nt8.29□□□□□ -1.08
SCD6P45978 MFG1YDL233W 1377 nt8.29□□□□□ -1.08
SCD6P45978 WSC3YOL105C 1671 nt8.28□□□□□ -1.08 RIP-Chip
SCD6P45978 DIP5YPL265W 1827 nt8.27□□□□□ -1.09
SCD6P45978 HXT11YOL156W 1704 nt8.27□□□□□ -1.09
SCD6P45978 GID7YCL039W 2238 nt8.27□□□□□ -1.09
SCD6P45978 INO1YJL153C 1602 nt8.26□□□□□ -1.09
SCD6P45978 TDA4YJR116W 840 nt8.26□□□□□ -1.09
SCD6P45978 CPT1YNL130C 1182 nt8.26□□□□□ -1.09 RIP-Chip
SCD6P45978 LEA1YPL213W 717 nt8.26□□□□□ -1.09
SCD6P45978 ARG7YMR062C 1326 nt8.26□□□□□ -1.09
SCD6P45978 MAE1YKL029C 2010 nt8.25□□□□□ -1.09
SCD6P45978 HAC1YFL031W 717 nt8.25□□□□□ -1.09
SCD6P45978 SPR1YOR190W 1338 nt8.25□□□□□ -1.09
SCD6P45978 RRT6YGL146C 936 nt8.24□□□□□ -1.09
SCD6P45978 TPO4YOR273C 1980 nt8.22□□□□□ -1.09 RIP-Chip
SCD6P45978 PNS1YOR161C 1620 nt8.22□□□□□ -1.09
SCD6P45978 TGL5YOR081C 2250 nt8.22□□□□□ -1.09 RIP-Chip
SCD6P45978 GLY1YEL046C 1164 nt8.22□□□□□ -1.09
SCD6P45978 BAP3YDR046C 1815 nt8.22□□□□□ -1.09
SCD6P45978 ABP1YCR088W 1779 nt8.21□□□□□ -1.1 RIP-Chip
SCD6P45978 APT1YML022W 564 nt8.21□□□□□ -1.1
SCD6P45978 PRE5YMR314W 705 nt8.2□□□□□ -1.1
SCD6P45978 INM1YHR046C 888 nt8.19□□□□□ -1.1
SCD6P45978 TIF3YPR163C 1311 nt8.19□□□□□ -1.1
SCD6P45978 ALG7YBR243C 1347 nt8.18□□□□□ -1.1 RIP-Chip
SCD6P45978 SRM1YGL097W 1449 nt8.18□□□□□ -1.1 RIP-Chip
SCD6P45978 ARO3YDR035W 1113 nt8.17□□□□□ -1.1
SCD6P45978 YNL140CYNL140C 570 nt8.17□□□□□ -1.1
SCD6P45978 YHL008CYHL008C 1884 nt8.17□□□□□ -1.1 RIP-Chip
SCD6P45978 MRP7YNL005C 1116 nt8.16□□□□□ -1.1 RIP-Chip
SCD6P45978 WSC4YHL028W 1818 nt8.15□□□□□ -1.1
SCD6P45978 HOG1YLR113W 1308 nt8.15□□□□□ -1.1 RIP-Chip
SCD6P45978 YLR358CYLR358C 564 nt8.15□□□□□ -1.1
SCD6P45978 ESBP6YNL125C 2022 nt8.15□□□□□ -1.11
SCD6P45978 CPR2YHR057C 618 nt8.14□□□□□ -1.11
SCD6P45978 SNP1YIL061C 903 nt8.14□□□□□ -1.11
SCD6P45978 MNN9YPL050C 1188 nt8.14□□□□□ -1.11
SCD6P45978 MRN1YPL184C 1839 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)BtD(GUC)B 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)DtD(GUC)D 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)G1tD(GUC)G1 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)G2tD(GUC)G2 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)I1tD(GUC)I1 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)I2tD(GUC)I2 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)J1tD(GUC)J1 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)J2tD(GUC)J2 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)J3tD(GUC)J3 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)J4tD(GUC)J4 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)KtD(GUC)K 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)L1tD(GUC)L1 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)L2tD(GUC)L2 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)MtD(GUC)M 72 nt8.13□□□□□ -1.11
SCD6P45978 tD(GUC)OtD(GUC)O 72 nt8.13□□□□□ -1.11
SCD6P45978 SDH8YBR269C 417 nt8.13□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 88.3 ms