Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.778e-8■■■■■ 36.1
TROVE2P10155 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.64■□□□□ 0.098e-8■■■■■ 36.1
TROVE2P10155 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.158e-8■■■■■ 36.1
TROVE2P10155 PPARGC1B-204ENST00000403750 3146 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.468e-8■■■■■ 36.1
TROVE2P10155 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.958e-8■■■■■ 36.1
TROVE2P10155 Y_RNA.653-201ENST00000459091 95 ntBASIC0.18□□□□□ -2.388e-8■■■■■ 36.1
TROVE2P10155 CDK15-208ENST00000488419 1828 ntTSL 29.86□□□□□ -0.834e-11■■■■■ 35.8
TROVE2P10155 CDK15-205ENST00000451080 1437 ntTSL 1 (best)9.55□□□□□ -0.884e-11■■■■■ 35.8
TROVE2P10155 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.034e-11■■■■■ 35.8
TROVE2P10155 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.114e-11■■■■■ 35.8
TROVE2P10155 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.62□□□□□ -1.194e-11■■■■■ 35.8
TROVE2P10155 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.494e-11■■■■■ 35.8
TROVE2P10155 Y_RNA.331-201ENST00000365267 102 ntBASIC0.23□□□□□ -2.374e-11■■■■■ 35.8
TROVE2P10155 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.42■□□□□ 0.061e-20■■■■■ 35.5
TROVE2P10155 Y_RNA.718-201ENST00000517110 102 ntBASIC0.1□□□□□ -2.391e-20■■■■■ 35.5
TROVE2P10155 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.13■□□□□ 0.659e-8■■■■■ 35.4
TROVE2P10155 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)19.13■□□□□ 0.659e-8■■■■■ 35.4
TROVE2P10155 AC024592.3-201ENST00000592091 2118 ntTSL 218.45■□□□□ 0.549e-8■■■■■ 35.4
TROVE2P10155 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.63■□□□□ 0.419e-8■■■■■ 35.4
TROVE2P10155 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.24■□□□□ 0.359e-8■■■■■ 35.4
TROVE2P10155 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.29e-8■■■■■ 35.4
TROVE2P10155 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.75■□□□□ 0.119e-8■■■■■ 35.4
TROVE2P10155 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.069e-8■■■■■ 35.4
TROVE2P10155 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.21■□□□□ 0.039e-8■■■■■ 35.4
TROVE2P10155 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 215.21■□□□□ 0.039e-8■■■■■ 35.4
TROVE2P10155 NDUFA11-206ENST00000593233 657 ntTSL 314.16□□□□□ -0.149e-8■■■■■ 35.4
TROVE2P10155 NDUFA11-204ENST00000591341 403 ntTSL 214.16□□□□□ -0.149e-8■■■■■ 35.4
TROVE2P10155 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.579e-8■■■■■ 35.4
TROVE2P10155 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.485e-21■■■■■ 35.3
TROVE2P10155 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.6□□□□□ -2.675e-21■■■■■ 35.3
TROVE2P10155 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.035e-8■■■■■ 34.9
TROVE2P10155 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.11■□□□□ 0.815e-8■■■■■ 34.9
TROVE2P10155 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.484e-10■■■■■ 34.9
TROVE2P10155 IGBP1-202ENST00000356413 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.984e-10■■■■■ 34.9
TROVE2P10155 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.282e-9■■■■■ 34.3
TROVE2P10155 RILPL1-201ENST00000340724 2389 ntTSL 514.68□□□□□ -0.064e-7■■■■■ 34
TROVE2P10155 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.96■□□□□ 0.952e-7■■■■■ 33.8
TROVE2P10155 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.28■□□□□ 0.042e-7■■■■■ 33.8
TROVE2P10155 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)15.18■□□□□ 0.022e-7■■■■■ 33.8
TROVE2P10155 C22orf34-205ENST00000416411 542 ntTSL 412.9□□□□□ -0.342e-7■■■■■ 33.8
TROVE2P10155 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC10.67□□□□□ -0.72e-7■■■■■ 33.8
TROVE2P10155 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.612e-7■■■■■ 33.8
TROVE2P10155 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC10.92□□□□□ -0.661e-7■■■■■ 33.8
TROVE2P10155 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC8.45□□□□□ -1.061e-7■■■■■ 33.8
TROVE2P10155 RNF126-207ENST00000605891 1671 ntTSL 528.89■■■□□ 2.213e-7■■■■■ 33.2
TROVE2P10155 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.043e-7■■■■■ 33.2
TROVE2P10155 RNF126-203ENST00000589762 963 ntTSL 225.05■■□□□ 1.63e-7■■■■■ 33.2
TROVE2P10155 RNF126-205ENST00000591394 733 ntTSL 220.3■□□□□ 0.843e-7■■■■■ 33.2
TROVE2P10155 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.75■□□□□ 0.593e-7■■■■■ 33.2
TROVE2P10155 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.53■□□□□ 0.563e-7■■■■■ 33.2
TROVE2P10155 MST1R-212ENST00000497001 1488 ntTSL 1 (best)16.72■□□□□ 0.273e-7■■■■■ 33.2
TROVE2P10155 RNF126-206ENST00000592626 652 ntTSL 215.97■□□□□ 0.153e-7■■■■■ 33.2
TROVE2P10155 MST1R-209ENST00000485044 1944 ntTSL 1 (best)15.92■□□□□ 0.143e-7■■■■■ 33.2
TROVE2P10155 KDM4B-210ENST00000592175 562 ntTSL 414.5□□□□□ -0.093e-7■■■■■ 33.2
TROVE2P10155 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.123e-7■■■■■ 33.2
TROVE2P10155 MST1R-211ENST00000493535 1626 ntTSL 1 (best)13.86□□□□□ -0.193e-7■■■■■ 33.2
TROVE2P10155 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC13.43□□□□□ -0.263e-7■■■■■ 33.2
TROVE2P10155 MST1R-203ENST00000411578 4683 ntTSL 513.31□□□□□ -0.283e-7■■■■■ 33.2
TROVE2P10155 MST1R-208ENST00000468525 2727 ntTSL 1 (best)12.67□□□□□ -0.383e-7■■■■■ 33.2
TROVE2P10155 MST1R-213ENST00000612032 1065 ntTSL 1 (best) BASIC11.76□□□□□ -0.533e-7■■■■■ 33.2
TROVE2P10155 AKT1-212ENST00000555380 534 ntTSL 411.27□□□□□ -0.614e-6■■■■■ 33.2
TROVE2P10155 MST1R-202ENST00000344206 4198 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.623e-7■■■■■ 33.2
TROVE2P10155 MIR194-2-201ENST00000384864 85 ntBASIC10.39□□□□□ -0.753e-7■■■■■ 33.2
TROVE2P10155 KDM4B-207ENST00000588961 560 ntTSL 48.84□□□□□ -0.993e-7■■■■■ 33.2
TROVE2P10155 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.21□□□□□ -2.441e-6■■■■■ 32.7
TROVE2P10155 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.752e-7■■■■■ 32.2
TROVE2P10155 ABRAXAS1-208ENST00000515303 1732 ntTSL 1 (best) BASIC7.8□□□□□ -1.167e-12■■■■■ 32.2
TROVE2P10155 SKI-202ENST00000478223 294 ntTSL 310.35□□□□□ -0.756e-7■■■■■ 32.1
TROVE2P10155 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.83■□□□□ 0.611e-12■■■■■ 31.6
TROVE2P10155 ZNF580-206ENST00000592881 1019 ntTSL 318.41■□□□□ 0.547e-7■■■■■ 31.6
TROVE2P10155 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.531e-12■■■■■ 31.6
TROVE2P10155 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.281e-12■■■■■ 31.6
TROVE2P10155 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.337e-7■■■■■ 31.6
TROVE2P10155 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC10.62□□□□□ -0.711e-12■■■■■ 31.6
TROVE2P10155 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC10.32□□□□□ -0.767e-7■■■■■ 31.6
TROVE2P10155 DIP2B-203ENST00000546732 3514 ntTSL 29.51□□□□□ -0.891e-12■■■■■ 31.6
TROVE2P10155 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.141e-12■■■■■ 31.6
TROVE2P10155 Y_RNA.51-201ENST00000362725 102 ntBASIC0.78□□□□□ -2.287e-7■■■■■ 31.6
TROVE2P10155 Y_RNA.772-201ENST00000606692 102 ntBASIC0.13□□□□□ -2.397e-7■■■■■ 31.6
TROVE2P10155 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.31□□□□□ -2.467e-7■■■■■ 31.6
TROVE2P10155 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.42□□□□□ -2.487e-7■■■■■ 31.6
TROVE2P10155 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.7□□□□□ -2.527e-7■■■■■ 31.6
TROVE2P10155 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.88□□□□□ -2.551e-12■■■■■ 31.6
TROVE2P10155 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.86□□□□□ -2.711e-12■■■■■ 31.6
TROVE2P10155 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.55■■□□□ 1.525e-8■■■■■ 31.2
TROVE2P10155 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-8■■■■■ 31.2
TROVE2P10155 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.35□□□□□ -2.795e-8■■■■■ 31.2
TROVE2P10155 CAMTA2-213ENST00000575192 596 ntTSL 414.13□□□□□ -0.154e-6■■■■■ 31
TROVE2P10155 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.98□□□□□ -0.174e-6■■■■■ 31
TROVE2P10155 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC13.17□□□□□ -0.34e-6■■■■■ 31
TROVE2P10155 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.344e-6■■■■■ 31
TROVE2P10155 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.374e-6■■■■■ 31
TROVE2P10155 CAMTA2-212ENST00000574951 4431 ntTSL 512.63□□□□□ -0.394e-6■■■■■ 31
TROVE2P10155 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC11.63□□□□□ -0.554e-6■■■■■ 31
TROVE2P10155 CAMTA2-207ENST00000572326 437 ntTSL 311.41□□□□□ -0.584e-6■■■■■ 31
TROVE2P10155 CKB-205ENST00000553878 856 ntTSL 226.57■■□□□ 1.849e-7■■■■■ 31
TROVE2P10155 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.239e-7■■■■■ 31
TROVE2P10155 NCOR1-206ENST00000411510 1883 ntTSL 1 (best)21.93■■□□□ 1.19e-7■■■■■ 31
TROVE2P10155 CKB-217ENST00000557569 579 ntTSL 221.64■■□□□ 1.059e-7■■■■■ 31
TROVE2P10155 CKB-208ENST00000554426 775 ntTSL 521.64■■□□□ 1.059e-7■■■■■ 31
Retrieved 100 of 4,203 protein–RNA pairs in 142.4 ms