Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 CAK1YFL029C 1107 nt7.68□□□□□ -1.18
RPL40BP0CH09 AIM1YAL046C 357 nt7.67□□□□□ -1.18
RPL40BP0CH09 YLR046CYLR046C 813 nt7.67□□□□□ -1.18
RPL40BP0CH09 AAD14YNL331C 1131 nt7.66□□□□□ -1.18
RPL40BP0CH09 ENT4YLL038C 744 nt7.65□□□□□ -1.18
RPL40BP0CH09 BXI1YNL305C 894 nt7.65□□□□□ -1.18
RPL40BP0CH09 PIH1YHR034C 1035 nt7.64□□□□□ -1.19
RPL40BP0CH09 YNR064CYNR064C 873 nt7.64□□□□□ -1.19
RPL40BP0CH09 MEX67YPL169C 1800 nt7.64□□□□□ -1.19
RPL40BP0CH09 MCP1YOR228C 909 nt7.63□□□□□ -1.19
RPL40BP0CH09 ATP2YJR121W 1536 nt7.62□□□□□ -1.19
RPL40BP0CH09 Q0182Q0182 405 nt7.61□□□□□ -1.19
RPL40BP0CH09 YPT11YNL304W 1254 nt7.61□□□□□ -1.19
RPL40BP0CH09 SRP54YPR088C 1626 nt7.6□□□□□ -1.19
RPL40BP0CH09 RSM7YJR113C 744 nt7.59□□□□□ -1.19
RPL40BP0CH09 SAC7YDR389W 1965 nt7.59□□□□□ -1.2
RPL40BP0CH09 YBL111CYBL111C 2004 nt7.58□□□□□ -1.2
RPL40BP0CH09 INH1YDL181W 258 nt7.58□□□□□ -1.2
RPL40BP0CH09 YIL168WYIL168W 384 nt7.58□□□□□ -1.2
RPL40BP0CH09 RPC31YNL151C 756 nt7.58□□□□□ -1.2
RPL40BP0CH09 OCH1YGL038C 1443 nt7.58□□□□□ -1.2
RPL40BP0CH09 SWT21YNL187W 1074 nt7.57□□□□□ -1.2
RPL40BP0CH09 ITR2YOL103W 1830 nt7.57□□□□□ -1.2
RPL40BP0CH09 KRR1YCL059C 951 nt7.56□□□□□ -1.2
RPL40BP0CH09 HAC1YFL031W 717 nt7.56□□□□□ -1.2
RPL40BP0CH09 PLB3YOL011W 2061 nt7.55□□□□□ -1.2
RPL40BP0CH09 YLR460CYLR460C 1131 nt7.55□□□□□ -1.2
RPL40BP0CH09 MIM1YOL026C 342 nt7.55□□□□□ -1.2
RPL40BP0CH09 YPL136WYPL136W 369 nt7.55□□□□□ -1.2
RPL40BP0CH09 SPE3YPR069C 882 nt7.55□□□□□ -1.2
RPL40BP0CH09 MDL2YPL270W 2322 nt7.55□□□□□ -1.2
RPL40BP0CH09 tD(GUC)BtD(GUC)B 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)DtD(GUC)D 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)G1tD(GUC)G1 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)G2tD(GUC)G2 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)I1tD(GUC)I1 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)I2tD(GUC)I2 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)J1tD(GUC)J1 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)J2tD(GUC)J2 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)J3tD(GUC)J3 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)J4tD(GUC)J4 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)KtD(GUC)K 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)L1tD(GUC)L1 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)L2tD(GUC)L2 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)MtD(GUC)M 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 tD(GUC)OtD(GUC)O 72 nt7.54□□□□□ -1.2
RPL40BP0CH09 ATP23YNR020C 813 nt7.54□□□□□ -1.2
RPL40BP0CH09 GID7YCL039W 2238 nt7.54□□□□□ -1.2
RPL40BP0CH09 DPL1YDR294C 1770 nt7.52□□□□□ -1.21
RPL40BP0CH09 AIM46YHR199C 933 nt7.52□□□□□ -1.21
RPL40BP0CH09 SNX3YOR357C 489 nt7.52□□□□□ -1.21
RPL40BP0CH09 KEL3YPL263C 1956 nt7.51□□□□□ -1.21
RPL40BP0CH09 SUN4YNL066W 1263 nt7.51□□□□□ -1.21
RPL40BP0CH09 LEU4YNL104C 1860 nt7.51□□□□□ -1.21
RPL40BP0CH09 CHS7YHR142W 951 nt7.5□□□□□ -1.21
RPL40BP0CH09 HBS1YKR084C 1836 nt7.5□□□□□ -1.21
RPL40BP0CH09 FET5YFL041W 1869 nt7.49□□□□□ -1.21
RPL40BP0CH09 LGE1YPL055C 999 nt7.49□□□□□ -1.21
RPL40BP0CH09 YKL053WYKL053W 375 nt7.48□□□□□ -1.21
RPL40BP0CH09 YPT31YER031C 672 nt7.47□□□□□ -1.21
RPL40BP0CH09 CPT1YNL130C 1182 nt7.47□□□□□ -1.21
RPL40BP0CH09 SFL1YOR140W 2301 nt7.46□□□□□ -1.21
RPL40BP0CH09 MET1YKR069W 1782 nt7.46□□□□□ -1.21
RPL40BP0CH09 OPI7YDR360W 435 nt7.46□□□□□ -1.22
RPL40BP0CH09 MET22YOL064C 1074 nt7.46□□□□□ -1.22
RPL40BP0CH09 NPP2YEL016C 1482 nt7.45□□□□□ -1.22
RPL40BP0CH09 ELO1YJL196C 933 nt7.45□□□□□ -1.22
RPL40BP0CH09 PTH2YBL057C 627 nt7.45□□□□□ -1.22
RPL40BP0CH09 snR31snR31 225 nt7.45□□□□□ -1.22
RPL40BP0CH09 MTO1YGL236C 2010 nt7.45□□□□□ -1.22
RPL40BP0CH09 IMD1YAR073W 1212 nt7.44□□□□□ -1.22
RPL40BP0CH09 ZIM17YNL310C 525 nt7.44□□□□□ -1.22
RPL40BP0CH09 UME1YPL139C 1383 nt7.44□□□□□ -1.22
RPL40BP0CH09 YDR467CYDR467C 327 nt7.43□□□□□ -1.22
RPL40BP0CH09 YDR387CYDR387C 1668 nt7.43□□□□□ -1.22
RPL40BP0CH09 PDC6YGR087C 1692 nt7.42□□□□□ -1.22
RPL40BP0CH09 tE(CUC)DtE(CUC)D 72 nt7.42□□□□□ -1.22
RPL40BP0CH09 tE(CUC)ItE(CUC)I 72 nt7.42□□□□□ -1.22
RPL40BP0CH09 NCA3YJL116C 1014 nt7.42□□□□□ -1.22
RPL40BP0CH09 OLA1YBR025C 1185 nt7.42□□□□□ -1.22
RPL40BP0CH09 IRC7YFR055W 1023 nt7.41□□□□□ -1.22
RPL40BP0CH09 CYS3YAL012W 1185 nt7.41□□□□□ -1.22
RPL40BP0CH09 ORT1YOR130C 879 nt7.41□□□□□ -1.22
RPL40BP0CH09 PTC6YCR079W 1329 nt7.41□□□□□ -1.22
RPL40BP0CH09 MPH3YJR160C 1809 nt7.41□□□□□ -1.22
RPL40BP0CH09 DUR3YHL016C 2208 nt7.4□□□□□ -1.22
RPL40BP0CH09 UFD1YGR048W 1086 nt7.4□□□□□ -1.22
RPL40BP0CH09 AIM20YIL158W 615 nt7.4□□□□□ -1.22
RPL40BP0CH09 FIT1YDR534C 1587 nt7.4□□□□□ -1.22
RPL40BP0CH09 PNS1YOR161C 1620 nt7.4□□□□□ -1.22
RPL40BP0CH09 SAN1YDR143C 1833 nt7.4□□□□□ -1.23
RPL40BP0CH09 YMR265CYMR265C 1386 nt7.39□□□□□ -1.23
RPL40BP0CH09 SPR1YOR190W 1338 nt7.39□□□□□ -1.23
RPL40BP0CH09 YKL147CYKL147C 618 nt7.39□□□□□ -1.23
RPL40BP0CH09 TRP2YER090W 1524 nt7.38□□□□□ -1.23
RPL40BP0CH09 YPQ1YOL092W 927 nt7.38□□□□□ -1.23
RPL40BP0CH09 CST26YBR042C 1194 nt7.38□□□□□ -1.23
RPL40BP0CH09 GPD2YOL059W 1323 nt7.37□□□□□ -1.23
RPL40BP0CH09 HXT11YOL156W 1704 nt7.37□□□□□ -1.23
RPL40BP0CH09 ESBP6YNL125C 2022 nt7.37□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms