Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 CROCCP3-202ENST00000420820 1947 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 AC106820.2-201ENST00000563775 3264 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 AC007322.3-201ENST00000426526 701 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 AC131212.1-201ENST00000613771 668 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 MIR6084-201ENST00000622012 110 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 AL136967.2-201ENST00000623968 743 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 AC008406.3-201ENST00000620001 1374 ntBASIC16.88■□□□□ 0.29
BEST4Q8NFU0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST4Q8NFU0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BEST4Q8NFU0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 IRS3P-201ENST00000223076 1006 ntBASIC16.86■□□□□ 0.29
BEST4Q8NFU0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 AC091799.1-201ENST00000422823 811 ntBASIC16.86■□□□□ 0.29
BEST4Q8NFU0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST4Q8NFU0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST4Q8NFU0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST4Q8NFU0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST4Q8NFU0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST4Q8NFU0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BEST4Q8NFU0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms