Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL2P13500 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCL2P13500 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL2P13500 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL2P13500 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL2P13500 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL2P13500 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL2P13500 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL2P13500 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCL2P13500 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCL2P13500 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCL2P13500 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL2P13500 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL2P13500 AC116351.2-201ENST00000606540 1585 ntBASIC17.15■□□□□ 0.34
CCL2P13500 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCL2P13500 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL2P13500 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL2P13500 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCL2P13500 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL2P13500 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL2P13500 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL2P13500 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL2P13500 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CCL2P13500 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCL2P13500 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCL2P13500 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCL2P13500 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.14■□□□□ 0.33
CCL2P13500 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CCL2P13500 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CCL2P13500 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCL2P13500 ABHD17AP1-201ENST00000358206 933 ntBASIC17.14■□□□□ 0.33
CCL2P13500 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.14■□□□□ 0.33
CCL2P13500 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.14■□□□□ 0.33
CCL2P13500 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.14■□□□□ 0.33
CCL2P13500 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.14■□□□□ 0.33
CCL2P13500 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.14■□□□□ 0.33
CCL2P13500 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.14■□□□□ 0.33
CCL2P13500 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL2P13500 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
CCL2P13500 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL2P13500 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.13■□□□□ 0.33
CCL2P13500 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CCL2P13500 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCL2P13500 KRT18P29-201ENST00000397031 1267 ntBASIC17.13■□□□□ 0.33
CCL2P13500 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCL2P13500 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.13■□□□□ 0.33
CCL2P13500 AL121906.2-201ENST00000621597 723 ntBASIC17.13■□□□□ 0.33
CCL2P13500 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL2P13500 AC125437.2-201ENST00000625180 2167 ntBASIC17.13■□□□□ 0.33
CCL2P13500 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL2P13500 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL2P13500 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL2P13500 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL2P13500 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCL2P13500 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
CCL2P13500 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL2P13500 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 TFP1-202ENST00000475455 1573 ntBASIC17.12■□□□□ 0.33
CCL2P13500 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCL2P13500 AP001271.2-201ENST00000624018 1556 ntBASIC17.12■□□□□ 0.33
CCL2P13500 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL2P13500 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL2P13500 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 319.6 ms