Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 TUBB8P6-201ENST00000436895 1288 ntBASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PCDHAC2Q9Y5I4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PCDHAC2Q9Y5I4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHAC2Q9Y5I4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 AC092720.2-201ENST00000602388 1665 ntBASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 EGLN1P1-201ENST00000531623 762 ntBASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 AC130371.2-201ENST00000619443 611 ntBASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 KRT16P6-202ENST00000425692 1426 ntBASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHAC2Q9Y5I4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 C2orf69P3-201ENST00000565542 1120 ntBASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 RCC2P6-201ENST00000526625 1557 ntBASIC23.56■■□□□ 1.36
PCDHAC2Q9Y5I4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 SLC25A1P4-201ENST00000567977 778 ntBASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 DGCR10-201ENST00000609839 495 ntBASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 PHGDH-210ENST00000641115 1638 ntBASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHAC2Q9Y5I4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 AC087388.1-201ENST00000571370 1112 ntBASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 AC131212.4-201ENST00000623606 975 ntBASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHAC2Q9Y5I4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHAC2Q9Y5I4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms