Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 LMNA-219ENST00000502751 570 ntTSL 414.05□□□□□ -0.164e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-206ENST00000594823 819 ntTSL 513.34□□□□□ -0.274e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.334e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.344e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-203ENST00000412249 596 ntAPPRIS ALT2 TSL 212.87□□□□□ -0.354e-6■□□□□ 8
PRPF8Q6P2Q9 SF3B2-202ENST00000524475 432 ntTSL 312.8□□□□□ -0.364e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.494e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-206ENST00000419358 531 ntAPPRIS ALT2 TSL 211.95□□□□□ -0.54e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-207ENST00000425781 583 ntAPPRIS ALT2 TSL 311.72□□□□□ -0.534e-6■□□□□ 8
PRPF8Q6P2Q9 KIFC3-233ENST00000569222 443 ntTSL 311.47□□□□□ -0.574e-6■□□□□ 8
PRPF8Q6P2Q9 LMNA-210ENST00000469565 591 ntTSL 411.35□□□□□ -0.594e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-204ENST00000593381 566 ntTSL 411.08□□□□□ -0.644e-6■□□□□ 8
PRPF8Q6P2Q9 EHBP1-214ENST00000467436 538 ntTSL 410.82□□□□□ -0.684e-6■□□□□ 8
PRPF8Q6P2Q9 LRRC8A-204ENST00000483638 470 ntTSL 310.34□□□□□ -0.754e-6■□□□□ 8
PRPF8Q6P2Q9 HPS1-206ENST00000462743 431 ntTSL 310.33□□□□□ -0.764e-6■□□□□ 8
PRPF8Q6P2Q9 KIFC3-234ENST00000569619 698 ntTSL 310.06□□□□□ -0.84e-6■□□□□ 8
PRPF8Q6P2Q9 KIFC3-220ENST00000565351 297 ntTSL 1 (best)9.9□□□□□ -0.824e-6■□□□□ 8
PRPF8Q6P2Q9 YWHAH-206ENST00000479649 662 ntTSL 39.67□□□□□ -0.864e-6■□□□□ 8
PRPF8Q6P2Q9 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC9.17□□□□□ -0.944e-6■□□□□ 8
PRPF8Q6P2Q9 TACC2-217ENST00000491540 547 ntTSL 58.86□□□□□ -0.994e-6■□□□□ 8
PRPF8Q6P2Q9 TACC2-219ENST00000492689 2653 ntTSL 28.13□□□□□ -1.114e-6■□□□□ 8
PRPF8Q6P2Q9 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.314e-6■□□□□ 8
PRPF8Q6P2Q9 FAM114A1-202ENST00000508737 1242 ntTSL 1 (best)6.81□□□□□ -1.324e-6■□□□□ 8
PRPF8Q6P2Q9 TACC2-222ENST00000498721 586 ntTSL 26.18□□□□□ -1.424e-6■□□□□ 8
PRPF8Q6P2Q9 MADD-218ENST00000494403 180 ntTSL 35.08□□□□□ -1.64e-6■□□□□ 8
PRPF8Q6P2Q9 AFF4-208ENST00000478588 897 ntTSL 33.26□□□□□ -1.894e-6■□□□□ 8
PRPF8Q6P2Q9 ZBTB20-218ENST00000488663 1495 ntTSL 1 (best)2.81□□□□□ -1.964e-6■□□□□ 8
PRPF8Q6P2Q9 BPTF-218ENST00000584931 571 ntTSL 32.7□□□□□ -1.984e-6■□□□□ 8
PRPF8Q6P2Q9 BPTF-215ENST00000582406 378 ntTSL 31.83□□□□□ -2.124e-6■□□□□ 8
PRPF8Q6P2Q9 NUCKS1-202ENST00000464938 228 ntTSL 2-0.63□□□□□ -2.514e-6■□□□□ 8
PRPF8Q6P2Q9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.979e-7■□□□□ 8
PRPF8Q6P2Q9 RASSF1-208ENST00000488024 1385 ntTSL 220.79■□□□□ 0.929e-7■□□□□ 8
PRPF8Q6P2Q9 HNRNPLL-211ENST00000498516 655 ntTSL 319.39■□□□□ 0.699e-7■□□□□ 8
PRPF8Q6P2Q9 RASSF1-209ENST00000494145 1358 ntTSL 1 (best)18.9■□□□□ 0.629e-7■□□□□ 8
PRPF8Q6P2Q9 RASSF1-206ENST00000478619 2060 ntTSL 217.59■□□□□ 0.419e-7■□□□□ 8
PRPF8Q6P2Q9 FCHO1-215ENST00000596522 533 ntTSL 411.86□□□□□ -0.519e-7■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-201ENST00000594027 294 ntTSL 39.23□□□□□ -0.933e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-204ENST00000598754 470 ntTSL 29.23□□□□□ -0.933e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC9.11□□□□□ -0.953e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-205ENST00000599817 340 ntTSL 29.09□□□□□ -0.953e-18■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-202ENST00000595673 304 ntTSL 38.03□□□□□ -1.123e-18■□□□□ 8
PRPF8Q6P2Q9 KANSL1-224ENST00000639279 387 ntTSL 35.81□□□□□ -1.489e-7■□□□□ 8
PRPF8Q6P2Q9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.7□□□□□ -1.53e-18■□□□□ 8
PRPF8Q6P2Q9 KANSL1-216ENST00000577114 629 ntTSL 54.19□□□□□ -1.749e-7■□□□□ 8
PRPF8Q6P2Q9 LBR-206ENST00000441022 536 ntTSL 23.33□□□□□ -1.889e-7■□□□□ 8
PRPF8Q6P2Q9 RAC2-206ENST00000469532 752 ntTSL 213.87□□□□□ -0.196e-7■□□□□ 8
PRPF8Q6P2Q9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.266e-7■□□□□ 8
PRPF8Q6P2Q9 RAC2-205ENST00000441619 705 ntTSL 57.55□□□□□ -1.26e-7■□□□□ 8
PRPF8Q6P2Q9 PSMB4-202ENST00000466425 665 ntTSL 25□□□□□ -1.616e-7■□□□□ 8
PRPF8Q6P2Q9 MBD6-202ENST00000546632 607 ntTSL 218.54■□□□□ 0.564e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-210ENST00000549623 544 ntTSL 418.14■□□□□ 0.494e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-213ENST00000552255 509 ntTSL 414.18□□□□□ -0.144e-8■□□□□ 8
PRPF8Q6P2Q9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.99□□□□□ -0.174e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-209ENST00000549231 538 ntTSL 412.69□□□□□ -0.384e-8■□□□□ 8
PRPF8Q6P2Q9 MAX-208ENST00000553951 1092 ntTSL 212.29□□□□□ -0.444e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-207ENST00000548887 568 ntTSL 411.85□□□□□ -0.514e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-211ENST00000551351 532 ntTSL 410.94□□□□□ -0.664e-8■□□□□ 8
PRPF8Q6P2Q9 ABCC1-208ENST00000576557 542 ntTSL 410.93□□□□□ -0.661e-11■□□□□ 8
PRPF8Q6P2Q9 MBD6-203ENST00000546805 596 ntTSL 510.07□□□□□ -0.84e-8■□□□□ 8
PRPF8Q6P2Q9 MBD6-208ENST00000549042 533 ntTSL 49.61□□□□□ -0.874e-8■□□□□ 8
PRPF8Q6P2Q9 GDPD5-212ENST00000531759 2633 ntTSL 59.13□□□□□ -0.954e-8■□□□□ 8
PRPF8Q6P2Q9 HNRNPR-206ENST00000464516 557 ntTSL 26.94□□□□□ -1.34e-8■□□□□ 8
Retrieved 62 of 73,762 protein–RNA pairs in 2483.5 ms