Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 AC007952.6-201ENST00000573168 2673 ntBASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 AC003957.1-201ENST00000625108 2673 ntBASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 AC023632.3-201ENST00000521633 145 ntBASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.31■□□□□ 0.68
SNAP47Q5SQN1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 AC133681.1-201ENST00000465482 601 ntBASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAP47Q5SQN1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 RPS2P55-201ENST00000397318 883 ntBASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 AC107956.1-201ENST00000494359 873 ntBASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.29■□□□□ 0.68
SNAP47Q5SQN1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 TSPY7P-201ENST00000431358 1114 ntBASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNAP47Q5SQN1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms