Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 FSCN1P1-201ENST00000568912 1481 ntBASIC31.2■■■□□ 2.58
ARID3CA6NKF2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ARID3CA6NKF2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 AK4P3-201ENST00000418260 669 ntBASIC31.19■■■□□ 2.58
ARID3CA6NKF2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.19■■■□□ 2.58
ARID3CA6NKF2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 AL049796.1-201ENST00000565336 1766 ntBASIC31.18■■■□□ 2.58
ARID3CA6NKF2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 AC097488.1-201ENST00000507834 756 ntBASIC31.18■■■□□ 2.58
ARID3CA6NKF2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ARID3CA6NKF2 AP006587.1-201ENST00000534129 1502 ntBASIC31.18■■■□□ 2.58
ARID3CA6NKF2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC31.17■■■□□ 2.58
ARID3CA6NKF2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
ARID3CA6NKF2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC31.17■■■□□ 2.58
ARID3CA6NKF2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC31.17■■■□□ 2.58
ARID3CA6NKF2 AC022616.7-201ENST00000525383 220 ntBASIC31.17■■■□□ 2.58
ARID3CA6NKF2 EGLN1P1-201ENST00000531623 762 ntBASIC31.17■■■□□ 2.58
ARID3CA6NKF2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ARID3CA6NKF2 AL445675.2-201ENST00000620291 557 ntBASIC31.17■■■□□ 2.58
ARID3CA6NKF2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 TSPY14P-201ENST00000303979 915 ntBASIC31.16■■■□□ 2.58
ARID3CA6NKF2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 AC117947.1-201ENST00000427448 529 ntBASIC31.16■■■□□ 2.58
ARID3CA6NKF2 AC004980.1-204ENST00000429707 299 ntBASIC31.16■■■□□ 2.58
ARID3CA6NKF2 AP005242.2-201ENST00000580065 1175 ntBASIC31.16■■■□□ 2.58
ARID3CA6NKF2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ARID3CA6NKF2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 GRAMD4P8-201ENST00000605465 1115 ntBASIC31.15■■■□□ 2.58
ARID3CA6NKF2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ARID3CA6NKF2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC31.14■■■□□ 2.58
ARID3CA6NKF2 KRT8P17-201ENST00000453110 1448 ntBASIC31.14■■■□□ 2.58
ARID3CA6NKF2 PLK5-205ENST00000642079 1969 ntBASIC31.14■■■□□ 2.57
ARID3CA6NKF2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.57
ARID3CA6NKF2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 AC008040.2-201ENST00000461049 708 ntBASIC31.13■■■□□ 2.57
ARID3CA6NKF2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARID3CA6NKF2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms