Protein–RNA interactions for Protein: Q08004

BUD20, Bud site selection protein 20, yeastyeast

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BUD20Q08004 FAB1YFR019W 6837 nt1.75□□□□□ -2.13
BUD20Q08004 CLU1YMR012W 3834 nt1.74□□□□□ -2.13
BUD20Q08004 YOR376W-AYOR376W-A 156 nt1.74□□□□□ -2.13
BUD20Q08004 YDL114W-AYDL114W-A 114 nt1.72□□□□□ -2.13
BUD20Q08004 CFT1YDR301W 4074 nt1.71□□□□□ -2.14
BUD20Q08004 snR67snR67 82 nt1.69□□□□□ -2.14
BUD20Q08004 MLP2YIL149C 5040 nt1.69□□□□□ -2.14
BUD20Q08004 LAA1YJL207C 6045 nt1.69□□□□□ -2.14
BUD20Q08004 CDC39YCR093W 6327 nt1.69□□□□□ -2.14
BUD20Q08004 NUP192YJL039C 5052 nt1.67□□□□□ -2.14
BUD20Q08004 tT(UGU)HtT(UGU)H 72 nt1.65□□□□□ -2.15
BUD20Q08004 YGR130CYGR130C 2451 nt1.64□□□□□ -2.15
BUD20Q08004 REV3YPL167C 4515 nt1.62□□□□□ -2.15
BUD20Q08004 YMR247W-AYMR247W-A 144 nt1.62□□□□□ -2.15
BUD20Q08004 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
BUD20Q08004 YKL106C-AYKL106C-A 120 nt1.61□□□□□ -2.15
BUD20Q08004 YNL284C-BYNL284C-B 5268 nt1.61□□□□□ -2.15
BUD20Q08004 tV(UAC)QtV(UAC)Q 76 nt1.58□□□□□ -2.16
BUD20Q08004 YOR093CYOR093C 4947 nt1.54□□□□□ -2.16
BUD20Q08004 BRR2YER172C 6492 nt1.54□□□□□ -2.16
BUD20Q08004 SPT7YBR081C 3999 nt1.53□□□□□ -2.16
BUD20Q08004 snR40snR40 97 nt1.53□□□□□ -2.16
BUD20Q08004 SPC110YDR356W 2835 nt1.53□□□□□ -2.17
BUD20Q08004 YNL054W-BYNL054W-B 5250 nt1.52□□□□□ -2.17
BUD20Q08004 YMR160WYMR160W 2451 nt1.51□□□□□ -2.17
BUD20Q08004 SSK2YNR031C 4740 nt1.51□□□□□ -2.17
BUD20Q08004 VAM6YDL077C 3150 nt1.48□□□□□ -2.17
BUD20Q08004 DNF3YMR162C 4971 nt1.46□□□□□ -2.18
BUD20Q08004 MEC1YBR136W 7107 nt1.45□□□□□ -2.18
BUD20Q08004 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
BUD20Q08004 YOR192C-BYOR192C-B 5313 nt1.41□□□□□ -2.18
BUD20Q08004 CCH1YGR217W 6120 nt1.39□□□□□ -2.19
BUD20Q08004 IRA1YBR140C 9279 nt1.39□□□□□ -2.19
BUD20Q08004 YPR117WYPR117W 7470 nt1.39□□□□□ -2.19
BUD20Q08004 RKR1YMR247C 4689 nt1.3□□□□□ -2.2
BUD20Q08004 LTE1YAL024C 4308 nt1.3□□□□□ -2.2
BUD20Q08004 tH(GUG)E1tH(GUG)E1 72 nt1.29□□□□□ -2.2
BUD20Q08004 tH(GUG)E2tH(GUG)E2 72 nt1.29□□□□□ -2.2
BUD20Q08004 tH(GUG)G1tH(GUG)G1 72 nt1.29□□□□□ -2.2
BUD20Q08004 tH(GUG)G2tH(GUG)G2 72 nt1.29□□□□□ -2.2
BUD20Q08004 tH(GUG)HtH(GUG)H 72 nt1.29□□□□□ -2.2
BUD20Q08004 tH(GUG)KtH(GUG)K 72 nt1.29□□□□□ -2.2
BUD20Q08004 tH(GUG)MtH(GUG)M 72 nt1.29□□□□□ -2.2
BUD20Q08004 HKR1YDR420W 5409 nt1.27□□□□□ -2.21
BUD20Q08004 FIG2YCR089W 4830 nt1.27□□□□□ -2.21
BUD20Q08004 SCC2YDR180W 4482 nt1.23□□□□□ -2.21
BUD20Q08004 snR77snR77 88 nt1.21□□□□□ -2.22
BUD20Q08004 YOR316C-AYOR316C-A 210 nt1.19□□□□□ -2.22
BUD20Q08004 MYO1YHR023W 5787 nt1.19□□□□□ -2.22
BUD20Q08004 PAU24YBR301W 363 nt1.17□□□□□ -2.22
BUD20Q08004 YBL100W-BYBL100W-B 5313 nt1.16□□□□□ -2.22
BUD20Q08004 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
BUD20Q08004 SBH2YER019C-A 267 nt1.12□□□□□ -2.23
BUD20Q08004 IML1YJR138W 4755 nt1.12□□□□□ -2.23
BUD20Q08004 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
BUD20Q08004 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
BUD20Q08004 MLP1YKR095W 5628 nt1.1□□□□□ -2.23
BUD20Q08004 BEM2YER155C 6504 nt1.07□□□□□ -2.24
BUD20Q08004 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
BUD20Q08004 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
BUD20Q08004 YML100W-AYML100W-A 174 nt1.06□□□□□ -2.24
BUD20Q08004 YOR186C-AYOR186C-A 210 nt1□□□□□ -2.25
BUD20Q08004 DOP1YDR141C 5097 nt1□□□□□ -2.25
BUD20Q08004 SOV1YMR066W 2697 nt0.89□□□□□ -2.27
BUD20Q08004 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
BUD20Q08004 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
BUD20Q08004 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
BUD20Q08004 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
BUD20Q08004 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
BUD20Q08004 IQG1YPL242C 4488 nt0.86□□□□□ -2.27
BUD20Q08004 ESP1YGR098C 4893 nt0.79□□□□□ -2.28
BUD20Q08004 PAU9YBL108C-A 129 nt0.78□□□□□ -2.28
BUD20Q08004 THO2YNL139C 4794 nt0.78□□□□□ -2.29
BUD20Q08004 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
BUD20Q08004 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
BUD20Q08004 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
BUD20Q08004 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
BUD20Q08004 FMP27YLR454W 7887 nt0.68□□□□□ -2.3
BUD20Q08004 YJL113WYJL113W 4647 nt0.66□□□□□ -2.3
BUD20Q08004 snR128snR128 126 nt0.65□□□□□ -2.31
BUD20Q08004 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
BUD20Q08004 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
BUD20Q08004 RPL41BYDL133C-A 78 nt0.55□□□□□ -2.32
BUD20Q08004 tC(GCA)QtC(GCA)Q 76 nt0.54□□□□□ -2.32
BUD20Q08004 snR161snR161 161 nt0.49□□□□□ -2.33
BUD20Q08004 YKL145W-AYKL145W-A 93 nt0.47□□□□□ -2.33
BUD20Q08004 tA(UGC)QtA(UGC)Q 76 nt0.46□□□□□ -2.34
BUD20Q08004 YOR335W-AYOR335W-A 81 nt0.45□□□□□ -2.34
BUD20Q08004 tF(GAA)BtF(GAA)B 73 nt0.44□□□□□ -2.34
BUD20Q08004 tF(GAA)FtF(GAA)F 73 nt0.44□□□□□ -2.34
BUD20Q08004 tF(GAA)GtF(GAA)G 73 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms