Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeast

Known RBP Predictions only

Length 86 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	Q06406	YDL159C-B	YDL159C-B	177 nt		-2.22	□□□□□ -2.76
LSM6	Q06406	ATP19	YOL077W-A	207 nt		-2.22	□□□□□ -2.76
LSM6	Q06406	YEL014C	YEL014C	306 nt		-2.24	□□□□□ -2.77
LSM6	Q06406	YMR172C-A	YMR172C-A	384 nt		-2.24	□□□□□ -2.77
LSM6	Q06406	YGR035C	YGR035C	351 nt		-2.3	□□□□□ -2.78
LSM6	Q06406	tR(UCU)Q1	tR(UCU)Q1	73 nt		-2.31	□□□□□ -2.78
LSM6	Q06406	YOR329W-A	YOR329W-A	210 nt		-2.31	□□□□□ -2.78
LSM6	Q06406	YAL063C-A	YAL063C-A	291 nt		-2.33	□□□□□ -2.78
LSM6	Q06406	YBR182C-A	YBR182C-A	195 nt		-2.34	□□□□□ -2.78
LSM6	Q06406	YAL016C-B	YAL016C-B	186 nt		-2.36	□□□□□ -2.79
LSM6	Q06406	YBR126W-B	YBR126W-B	144 nt		-2.36	□□□□□ -2.79
LSM6	Q06406	YJR157W	YJR157W	363 nt		-2.39	□□□□□ -2.79
LSM6	Q06406	YAL068W-A	YAL068W-A	255 nt		-2.43	□□□□□ -2.8
LSM6	Q06406	YDR183C-A	YDR183C-A	258 nt		-2.44	□□□□□ -2.8
LSM6	Q06406	YOR376W-A	YOR376W-A	156 nt		-2.44	□□□□□ -2.8
LSM6	Q06406	snR78	snR78	87 nt		-2.45	□□□□□ -2.8
LSM6	Q06406	YBR196C-A	YBR196C-A	150 nt		-2.46	□□□□□ -2.8
LSM6	Q06406	YLR299C-A	YLR299C-A	93 nt		-2.47	□□□□□ -2.8
LSM6	Q06406	YBR131C-A	YBR131C-A	90 nt		-2.47	□□□□□ -2.8
LSM6	Q06406	YOR293C-A	YOR293C-A	150 nt		-2.51	□□□□□ -2.81
LSM6	Q06406	YOR309C	YOR309C	381 nt		-2.51	□□□□□ -2.81
LSM6	Q06406	YLR222C-A	YLR222C-A	231 nt		-2.54	□□□□□ -2.82
LSM6	Q06406	tF(GAA)Q	tF(GAA)Q	75 nt		-2.55	□□□□□ -2.82
LSM6	Q06406	YER181C	YER181C	324 nt		-2.56	□□□□□ -2.82
LSM6	Q06406	YPL038W-A	YPL038W-A	192 nt		-2.61	□□□□□ -2.83
LSM6	Q06406	YOR102W	YOR102W	351 nt		-2.62	□□□□□ -2.83
LSM6	Q06406	YEL050W-A	YEL050W-A	192 nt		-2.64	□□□□□ -2.83
LSM6	Q06406	YLR342W-A	YLR342W-A	174 nt		-2.66	□□□□□ -2.84
LSM6	Q06406	YHR180C-B	YHR180C-B	105 nt		-2.67	□□□□□ -2.84
LSM6	Q06406	YOR316C-A	YOR316C-A	210 nt		-2.67	□□□□□ -2.84
LSM6	Q06406	YGL188C-A	YGL188C-A	141 nt		-2.68	□□□□□ -2.84
LSM6	Q06406	YPR197C	YPR197C	564 nt		-2.69	□□□□□ -2.84
LSM6	Q06406	snR48	snR48	113 nt		-2.69	□□□□□ -2.84
LSM6	Q06406	YDR413C	YDR413C	576 nt		-2.7	□□□□□ -2.84
LSM6	Q06406	YNL097C-B	YNL097C-B	123 nt		-2.73	□□□□□ -2.85
LSM6	Q06406	YKL118W	YKL118W	312 nt		-2.75	□□□□□ -2.85
LSM6	Q06406	tL(UAA)Q	tL(UAA)Q	85 nt		-2.76	□□□□□ -2.85
LSM6	Q06406	YKL106C-A	YKL106C-A	120 nt		-2.76	□□□□□ -2.85
LSM6	Q06406	snR55	snR55	98 nt		-2.77	□□□□□ -2.85
LSM6	Q06406	YPR012W	YPR012W	255 nt		-2.78	□□□□□ -2.85
LSM6	Q06406	RPL39	YJL189W	156 nt		-2.8	□□□□□ -2.86
LSM6	Q06406	YDR524W-C	YDR524W-C	90 nt		-2.81	□□□□□ -2.86
LSM6	Q06406	YNL277W-A	YNL277W-A	189 nt		-2.81	□□□□□ -2.86
LSM6	Q06406	YJL150W	YJL150W	303 nt		-2.93	□□□□□ -2.88
LSM6	Q06406	YHL015W-A	YHL015W-A	84 nt		-2.96	□□□□□ -2.88
LSM6	Q06406	YOL083C-A	YOL083C-A	141 nt		-2.96	□□□□□ -2.88
LSM6	Q06406	snR52	snR52	92 nt		-2.99	□□□□□ -2.89
LSM6	Q06406	YOR302W	YOR302W	78 nt		-3.01	□□□□□ -2.89
LSM6	Q06406	YDL240C-A	YDL240C-A	138 nt		-3.02	□□□□□ -2.89
LSM6	Q06406	YOL155W-A	YOL155W-A	135 nt		-3.02	□□□□□ -2.89
LSM6	Q06406	YDR157W	YDR157W	402 nt		-3.03	□□□□□ -2.89
LSM6	Q06406	YBR109W-A	YBR109W-A	225 nt		-3.03	□□□□□ -2.89
LSM6	Q06406	GIM4	YEL003W	336 nt		-3.04	□□□□□ -2.9
LSM6	Q06406	snR6	snR6	112 nt		-3.08	□□□□□ -2.9
LSM6	Q06406	YDR543C	YDR543C	300 nt		-3.1	□□□□□ -2.91
LSM6	Q06406	YBR296C-A	YBR296C-A	120 nt		-3.12	□□□□□ -2.91
LSM6	Q06406	RPL41A	YDL184C	78 nt		-3.14	□□□□□ -2.91
LSM6	Q06406	YNL198C	YNL198C	303 nt		-3.15	□□□□□ -2.91
LSM6	Q06406	snR56	snR56	88 nt		-3.17	□□□□□ -2.92
LSM6	Q06406	snR80	snR80	171 nt		-3.19	□□□□□ -2.92
LSM6	Q06406	YOR335W-A	YOR335W-A	81 nt		-3.21	□□□□□ -2.92
LSM6	Q06406	snR73	snR73	106 nt		-3.22	□□□□□ -2.92
LSM6	Q06406	SOM1	YEL059C-A	225 nt		-3.25	□□□□□ -2.93
LSM6	Q06406	RPL41B	YDL133C-A	78 nt		-3.27	□□□□□ -2.93
LSM6	Q06406	YPL152W-A	YPL152W-A	99 nt		-3.27	□□□□□ -2.93
LSM6	Q06406	snR38	snR38	95 nt		-3.29	□□□□□ -2.94
LSM6	Q06406	YDR118W-A	YDR118W-A	117 nt		-3.3	□□□□□ -2.94
LSM6	Q06406	snR65	snR65	100 nt		-3.42	□□□□□ -2.96
LSM6	Q06406	Q0017	Q0017	162 nt		-3.42	□□□□□ -2.96
LSM6	Q06406	YCR095W-A	YCR095W-A	159 nt		-3.45	□□□□□ -2.96
LSM6	Q06406	YDR524C-A	YDR524C-A	120 nt		-3.52	□□□□□ -2.97
LSM6	Q06406	YBL053W	YBL053W	375 nt		-3.52	□□□□□ -2.97
LSM6	Q06406	YBL071C-B	YBL071C-B	99 nt		-3.53	□□□□□ -2.97
LSM6	Q06406	YGR151C	YGR151C	336 nt		-3.54	□□□□□ -2.98
LSM6	Q06406	YDR406W-A	YDR406W-A	246 nt		-3.55	□□□□□ -2.98
LSM6	Q06406	YOL164W-A	YOL164W-A	183 nt		-3.56	□□□□□ -2.98
LSM6	Q06406	VAR1	Q0140	1197 nt		-3.61	□□□□□ -2.99
LSM6	Q06406	snR47	snR47	99 nt		-3.62	□□□□□ -2.99
LSM6	Q06406	YDL114W-A	YDL114W-A	114 nt		-3.71	□□□□□ -3
LSM6	Q06406	snR85	snR85	171 nt		-3.71	□□□□□ -3
LSM6	Q06406	Q0142	Q0142	177 nt		-3.71	□□□□□ -3
LSM6	Q06406	tV(UAC)Q	tV(UAC)Q	76 nt		-3.73	□□□□□ -3.01
LSM6	Q06406	YOL166W-A	YOL166W-A	156 nt		-3.74	□□□□□ -3.01
LSM6	Q06406	YBL100W-C	YBL100W-C	120 nt		-3.75	□□□□□ -3.01
LSM6	Q06406	YAL037C-A	YAL037C-A	93 nt		-3.79	□□□□□ -3.02
LSM6	Q06406	YKL225W	YKL225W	348 nt		-3.88	□□□□□ -3.03
LSM6	Q06406	YOR231C-A	YOR231C-A	201 nt		-3.89	□□□□□ -3.03
LSM6	Q06406	SPG3	YDR504C	384 nt		-3.92	□□□□□ -3.04
LSM6	Q06406	tS(GCU)Q1	tS(GCU)Q1	86 nt		-3.98	□□□□□ -3.05
LSM6	Q06406	snR87	snR87	109 nt		-4.03	□□□□□ -3.05
LSM6	Q06406	YCL001W-B	YCL001W-B	255 nt		-4.05	□□□□□ -3.06
LSM6	Q06406	YHR175W-A	YHR175W-A	150 nt		-4.14	□□□□□ -3.07
LSM6	Q06406	YNL337W	YNL337W	255 nt		-4.16	□□□□□ -3.08
LSM6	Q06406	YJR162C	YJR162C	351 nt		-4.2	□□□□□ -3.08
LSM6	Q06406	YKL096C-B	YKL096C-B	150 nt		-4.24	□□□□□ -3.09
LSM6	Q06406	YGR122C-A	YGR122C-A	129 nt		-4.25	□□□□□ -3.09
LSM6	Q06406	YDL159W-A	YDL159W-A	132 nt		-4.31	□□□□□ -3.1
LSM6	Q06406	tR(ACG)Q2	tR(ACG)Q2	74 nt		-4.31	□□□□□ -3.1
LSM6	Q06406	YMR046W-A	YMR046W-A	129 nt		-4.33	□□□□□ -3.1
LSM6	Q06406	YDR034C-A	YDR034C-A	177 nt		-4.39	□□□□□ -3.11

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