Protein–RNA interactions for Protein: Q06217

SMD2, Small nuclear ribonucleoprotein Sm D2, yeastyeast

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD2Q06217 ATP19YOL077W-A 207 nt-2.46□□□□□ -2.8
SMD2Q06217 YMR315W-AYMR315W-A 108 nt-2.47□□□□□ -2.8
SMD2Q06217 YMR172C-AYMR172C-A 384 nt-2.49□□□□□ -2.81
SMD2Q06217 snR78snR78 87 nt-2.5□□□□□ -2.81
SMD2Q06217 YDL159C-BYDL159C-B 177 nt-2.51□□□□□ -2.81
SMD2Q06217 YBR178WYBR178W 375 nt-2.54□□□□□ -2.82
SMD2Q06217 YEL014CYEL014C 306 nt-2.55□□□□□ -2.82
SMD2Q06217 YGR035CYGR035C 351 nt-2.55□□□□□ -2.82
SMD2Q06217 YEL050W-AYEL050W-A 192 nt-2.6□□□□□ -2.83
SMD2Q06217 YOR329W-AYOR329W-A 210 nt-2.62□□□□□ -2.83
SMD2Q06217 YBR182C-AYBR182C-A 195 nt-2.62□□□□□ -2.83
SMD2Q06217 YAL016C-BYAL016C-B 186 nt-2.65□□□□□ -2.83
SMD2Q06217 YAL068W-AYAL068W-A 255 nt-2.68□□□□□ -2.84
SMD2Q06217 YBR126W-BYBR126W-B 144 nt-2.69□□□□□ -2.84
SMD2Q06217 YDR183C-AYDR183C-A 258 nt-2.7□□□□□ -2.84
SMD2Q06217 YJR157WYJR157W 363 nt-2.7□□□□□ -2.84
SMD2Q06217 YLR299C-AYLR299C-A 93 nt-2.79□□□□□ -2.86
SMD2Q06217 YOR376W-AYOR376W-A 156 nt-2.79□□□□□ -2.86
SMD2Q06217 YBR131C-AYBR131C-A 90 nt-2.79□□□□□ -2.86
SMD2Q06217 YBR196C-AYBR196C-A 150 nt-2.79□□□□□ -2.86
SMD2Q06217 YOR293C-AYOR293C-A 150 nt-2.83□□□□□ -2.86
SMD2Q06217 tF(GAA)QtF(GAA)Q 75 nt-2.85□□□□□ -2.87
SMD2Q06217 YER181CYER181C 324 nt-2.85□□□□□ -2.87
SMD2Q06217 YLR222C-AYLR222C-A 231 nt-2.89□□□□□ -2.87
SMD2Q06217 YOR309CYOR309C 381 nt-2.9□□□□□ -2.87
SMD2Q06217 YOR102WYOR102W 351 nt-2.93□□□□□ -2.88
SMD2Q06217 YPL038W-AYPL038W-A 192 nt-2.93□□□□□ -2.88
SMD2Q06217 YDR413CYDR413C 576 nt-2.98□□□□□ -2.89
SMD2Q06217 YPR197CYPR197C 564 nt-2.98□□□□□ -2.89
SMD2Q06217 snR48snR48 113 nt-3□□□□□ -2.89
SMD2Q06217 YLR342W-AYLR342W-A 174 nt-3.01□□□□□ -2.89
SMD2Q06217 YOR316C-AYOR316C-A 210 nt-3.01□□□□□ -2.89
SMD2Q06217 YHR180C-BYHR180C-B 105 nt-3.02□□□□□ -2.89
SMD2Q06217 YGL188C-AYGL188C-A 141 nt-3.03□□□□□ -2.89
SMD2Q06217 YNL097C-BYNL097C-B 123 nt-3.07□□□□□ -2.9
SMD2Q06217 snR55snR55 98 nt-3.09□□□□□ -2.9
SMD2Q06217 RPL39YJL189W 156 nt-3.09□□□□□ -2.9
SMD2Q06217 YKL118WYKL118W 312 nt-3.1□□□□□ -2.91
SMD2Q06217 tL(UAA)QtL(UAA)Q 85 nt-3.12□□□□□ -2.91
SMD2Q06217 YKL106C-AYKL106C-A 120 nt-3.14□□□□□ -2.91
SMD2Q06217 YNL277W-AYNL277W-A 189 nt-3.16□□□□□ -2.92
SMD2Q06217 YPR012WYPR012W 255 nt-3.18□□□□□ -2.92
SMD2Q06217 YDR524W-CYDR524W-C 90 nt-3.22□□□□□ -2.92
SMD2Q06217 YJL150WYJL150W 303 nt-3.32□□□□□ -2.94
SMD2Q06217 YDL240C-AYDL240C-A 138 nt-3.35□□□□□ -2.95
SMD2Q06217 YHL015W-AYHL015W-A 84 nt-3.35□□□□□ -2.95
SMD2Q06217 YDR157WYDR157W 402 nt-3.36□□□□□ -2.95
SMD2Q06217 YOL155W-AYOL155W-A 135 nt-3.37□□□□□ -2.95
SMD2Q06217 YOL083C-AYOL083C-A 141 nt-3.39□□□□□ -2.95
SMD2Q06217 YOR302WYOR302W 78 nt-3.39□□□□□ -2.95
SMD2Q06217 snR52snR52 92 nt-3.39□□□□□ -2.95
SMD2Q06217 YBR109W-AYBR109W-A 225 nt-3.43□□□□□ -2.96
SMD2Q06217 GIM4YEL003W 336 nt-3.46□□□□□ -2.96
SMD2Q06217 YDR543CYDR543C 300 nt-3.5□□□□□ -2.97
SMD2Q06217 snR6snR6 112 nt-3.51□□□□□ -2.97
SMD2Q06217 YNL198CYNL198C 303 nt-3.52□□□□□ -2.97
SMD2Q06217 YBR296C-AYBR296C-A 120 nt-3.53□□□□□ -2.97
SMD2Q06217 snR56snR56 88 nt-3.55□□□□□ -2.98
SMD2Q06217 RPL41AYDL184C 78 nt-3.56□□□□□ -2.98
SMD2Q06217 snR80snR80 171 nt-3.65□□□□□ -2.99
SMD2Q06217 YDR118W-AYDR118W-A 117 nt-3.67□□□□□ -3
SMD2Q06217 SOM1YEL059C-A 225 nt-3.67□□□□□ -3
SMD2Q06217 YOR335W-AYOR335W-A 81 nt-3.68□□□□□ -3
SMD2Q06217 YPL152W-AYPL152W-A 99 nt-3.68□□□□□ -3
SMD2Q06217 snR73snR73 106 nt-3.69□□□□□ -3
SMD2Q06217 RPL41BYDL133C-A 78 nt-3.72□□□□□ -3
SMD2Q06217 snR38snR38 95 nt-3.75□□□□□ -3.01
SMD2Q06217 Q0017Q0017 162 nt-3.76□□□□□ -3.01
SMD2Q06217 snR65snR65 100 nt-3.82□□□□□ -3.02
SMD2Q06217 YCR095W-AYCR095W-A 159 nt-3.85□□□□□ -3.03
SMD2Q06217 YOL166W-AYOL166W-A 156 nt-3.91□□□□□ -3.04
SMD2Q06217 YBL071C-BYBL071C-B 99 nt-4□□□□□ -3.05
SMD2Q06217 YDR406W-AYDR406W-A 246 nt-4.01□□□□□ -3.05
SMD2Q06217 VAR1Q0140 1197 nt-4.01□□□□□ -3.05
SMD2Q06217 YGR151CYGR151C 336 nt-4.02□□□□□ -3.05
SMD2Q06217 YOL164W-AYOL164W-A 183 nt-4.02□□□□□ -3.05
SMD2Q06217 YDR524C-AYDR524C-A 120 nt-4.03□□□□□ -3.05
SMD2Q06217 YBL053WYBL053W 375 nt-4.03□□□□□ -3.05
SMD2Q06217 snR47snR47 99 nt-4.11□□□□□ -3.07
SMD2Q06217 Q0142Q0142 177 nt-4.2□□□□□ -3.08
SMD2Q06217 YDL114W-AYDL114W-A 114 nt-4.22□□□□□ -3.08
SMD2Q06217 snR85snR85 171 nt-4.22□□□□□ -3.08
SMD2Q06217 tV(UAC)QtV(UAC)Q 76 nt-4.23□□□□□ -3.09
SMD2Q06217 YBL100W-CYBL100W-C 120 nt-4.24□□□□□ -3.09
SMD2Q06217 YAL037C-AYAL037C-A 93 nt-4.27□□□□□ -3.09
SMD2Q06217 YOR231C-AYOR231C-A 201 nt-4.36□□□□□ -3.11
SMD2Q06217 YKL225WYKL225W 348 nt-4.4□□□□□ -3.11
SMD2Q06217 SPG3YDR504C 384 nt-4.48□□□□□ -3.13
SMD2Q06217 tS(GCU)Q1tS(GCU)Q1 86 nt-4.54□□□□□ -3.14
SMD2Q06217 snR87snR87 109 nt-4.59□□□□□ -3.14
SMD2Q06217 YCL001W-BYCL001W-B 255 nt-4.6□□□□□ -3.15
SMD2Q06217 YHR175W-AYHR175W-A 150 nt-4.64□□□□□ -3.15
SMD2Q06217 YNL337WYNL337W 255 nt-4.76□□□□□ -3.17
SMD2Q06217 tR(ACG)Q2tR(ACG)Q2 74 nt-4.83□□□□□ -3.18
SMD2Q06217 YJR162CYJR162C 351 nt-4.83□□□□□ -3.18
SMD2Q06217 YGR122C-AYGR122C-A 129 nt-4.84□□□□□ -3.18
SMD2Q06217 YKL096C-BYKL096C-B 150 nt-4.84□□□□□ -3.18
SMD2Q06217 YMR046W-AYMR046W-A 129 nt-4.84□□□□□ -3.18
SMD2Q06217 YDL159W-AYDL159W-A 132 nt-4.93□□□□□ -3.2
SMD2Q06217 snR58snR58 96 nt-4.98□□□□□ -3.21
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms