Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeastyeast

Known RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PKR1Q03880 YOR381W-AYOR381W-A 168 nt-1.89□□□□□ -2.71
PKR1Q03880 YEL014CYEL014C 306 nt-1.92□□□□□ -2.72
PKR1Q03880 YMR315W-AYMR315W-A 108 nt-1.92□□□□□ -2.72
PKR1Q03880 YBR178WYBR178W 375 nt-1.94□□□□□ -2.72
PKR1Q03880 YMR172C-AYMR172C-A 384 nt-1.95□□□□□ -2.72
PKR1Q03880 YDL159C-BYDL159C-B 177 nt-1.98□□□□□ -2.73
PKR1Q03880 YGR035CYGR035C 351 nt-2.03□□□□□ -2.73
PKR1Q03880 YOR329W-AYOR329W-A 210 nt-2.03□□□□□ -2.73
PKR1Q03880 YAL063C-AYAL063C-A 291 nt-2.06□□□□□ -2.74
PKR1Q03880 YBR182C-AYBR182C-A 195 nt-2.07□□□□□ -2.74
PKR1Q03880 YJR157WYJR157W 363 nt-2.1□□□□□ -2.75
PKR1Q03880 YEL050W-AYEL050W-A 192 nt-2.11□□□□□ -2.75
PKR1Q03880 YAL016C-BYAL016C-B 186 nt-2.11□□□□□ -2.75
PKR1Q03880 YAL068W-AYAL068W-A 255 nt-2.12□□□□□ -2.75
PKR1Q03880 YBR131C-AYBR131C-A 90 nt-2.12□□□□□ -2.75
PKR1Q03880 YOR293C-AYOR293C-A 150 nt-2.14□□□□□ -2.75
PKR1Q03880 YOR376W-AYOR376W-A 156 nt-2.16□□□□□ -2.76
PKR1Q03880 YDR183C-AYDR183C-A 258 nt-2.17□□□□□ -2.76
PKR1Q03880 YBR196C-AYBR196C-A 150 nt-2.2□□□□□ -2.76
PKR1Q03880 YLR222C-AYLR222C-A 231 nt-2.21□□□□□ -2.76
PKR1Q03880 YLR299C-AYLR299C-A 93 nt-2.21□□□□□ -2.76
PKR1Q03880 YOR309CYOR309C 381 nt-2.22□□□□□ -2.76
PKR1Q03880 tF(GAA)QtF(GAA)Q 75 nt-2.23□□□□□ -2.77
PKR1Q03880 YBR126W-BYBR126W-B 144 nt-2.28□□□□□ -2.77
PKR1Q03880 YER181CYER181C 324 nt-2.29□□□□□ -2.78
PKR1Q03880 YPL038W-AYPL038W-A 192 nt-2.29□□□□□ -2.78
PKR1Q03880 YOR102WYOR102W 351 nt-2.35□□□□□ -2.79
PKR1Q03880 YPR197CYPR197C 564 nt-2.36□□□□□ -2.79
PKR1Q03880 YGL188C-AYGL188C-A 141 nt-2.38□□□□□ -2.79
PKR1Q03880 YNL097C-BYNL097C-B 123 nt-2.39□□□□□ -2.79
PKR1Q03880 YHR180C-BYHR180C-B 105 nt-2.4□□□□□ -2.79
PKR1Q03880 YOR316C-AYOR316C-A 210 nt-2.4□□□□□ -2.79
PKR1Q03880 snR48snR48 113 nt-2.41□□□□□ -2.8
PKR1Q03880 tL(UAA)QtL(UAA)Q 85 nt-2.42□□□□□ -2.8
PKR1Q03880 YDR413CYDR413C 576 nt-2.43□□□□□ -2.8
PKR1Q03880 YLR342W-AYLR342W-A 174 nt-2.43□□□□□ -2.8
PKR1Q03880 snR55snR55 98 nt-2.45□□□□□ -2.8
PKR1Q03880 YKL118WYKL118W 312 nt-2.45□□□□□ -2.8
PKR1Q03880 YPR012WYPR012W 255 nt-2.47□□□□□ -2.8
PKR1Q03880 YKL106C-AYKL106C-A 120 nt-2.48□□□□□ -2.81
PKR1Q03880 YNL277W-AYNL277W-A 189 nt-2.48□□□□□ -2.81
PKR1Q03880 RPL39YJL189W 156 nt-2.52□□□□□ -2.81
PKR1Q03880 YDR524W-CYDR524W-C 90 nt-2.56□□□□□ -2.82
PKR1Q03880 YOR302WYOR302W 78 nt-2.6□□□□□ -2.83
PKR1Q03880 snR52snR52 92 nt-2.61□□□□□ -2.83
PKR1Q03880 YJL150WYJL150W 303 nt-2.62□□□□□ -2.83
PKR1Q03880 YHL015W-AYHL015W-A 84 nt-2.65□□□□□ -2.83
PKR1Q03880 YOL083C-AYOL083C-A 141 nt-2.66□□□□□ -2.84
PKR1Q03880 YOL155W-AYOL155W-A 135 nt-2.66□□□□□ -2.84
PKR1Q03880 YDL240C-AYDL240C-A 138 nt-2.67□□□□□ -2.84
PKR1Q03880 YDR157WYDR157W 402 nt-2.67□□□□□ -2.84
PKR1Q03880 GIM4YEL003W 336 nt-2.68□□□□□ -2.84
PKR1Q03880 YBR109W-AYBR109W-A 225 nt-2.69□□□□□ -2.84
PKR1Q03880 snR6snR6 112 nt-2.72□□□□□ -2.84
PKR1Q03880 YBR296C-AYBR296C-A 120 nt-2.81□□□□□ -2.86
PKR1Q03880 RPL41AYDL184C 78 nt-2.82□□□□□ -2.86
PKR1Q03880 YNL198CYNL198C 303 nt-2.83□□□□□ -2.86
PKR1Q03880 YOR335W-AYOR335W-A 81 nt-2.85□□□□□ -2.87
PKR1Q03880 snR56snR56 88 nt-2.86□□□□□ -2.87
PKR1Q03880 snR80snR80 171 nt-2.86□□□□□ -2.87
PKR1Q03880 YDR118W-AYDR118W-A 117 nt-2.87□□□□□ -2.87
PKR1Q03880 snR73snR73 106 nt-2.88□□□□□ -2.87
PKR1Q03880 YPL152W-AYPL152W-A 99 nt-2.89□□□□□ -2.87
PKR1Q03880 snR38snR38 95 nt-2.89□□□□□ -2.87
PKR1Q03880 SOM1YEL059C-A 225 nt-2.9□□□□□ -2.87
PKR1Q03880 Q0017Q0017 162 nt-2.96□□□□□ -2.88
PKR1Q03880 RPL41BYDL133C-A 78 nt-2.97□□□□□ -2.88
PKR1Q03880 YBL053WYBL053W 375 nt-3.04□□□□□ -2.9
PKR1Q03880 snR65snR65 100 nt-3.05□□□□□ -2.9
PKR1Q03880 YCR095W-AYCR095W-A 159 nt-3.08□□□□□ -2.9
PKR1Q03880 YBL071C-BYBL071C-B 99 nt-3.11□□□□□ -2.91
PKR1Q03880 YGR151CYGR151C 336 nt-3.14□□□□□ -2.91
PKR1Q03880 VAR1Q0140 1197 nt-3.15□□□□□ -2.91
PKR1Q03880 YOL164W-AYOL164W-A 183 nt-3.15□□□□□ -2.91
PKR1Q03880 YDR543CYDR543C 300 nt-3.17□□□□□ -2.92
PKR1Q03880 YDR524C-AYDR524C-A 120 nt-3.19□□□□□ -2.92
PKR1Q03880 snR47snR47 99 nt-3.19□□□□□ -2.92
PKR1Q03880 YDR406W-AYDR406W-A 246 nt-3.21□□□□□ -2.92
PKR1Q03880 YDL114W-AYDL114W-A 114 nt-3.32□□□□□ -2.94
PKR1Q03880 tV(UAC)QtV(UAC)Q 76 nt-3.32□□□□□ -2.94
PKR1Q03880 snR85snR85 171 nt-3.34□□□□□ -2.94
PKR1Q03880 YAL037C-AYAL037C-A 93 nt-3.4□□□□□ -2.95
PKR1Q03880 YBL100W-CYBL100W-C 120 nt-3.4□□□□□ -2.95
PKR1Q03880 YOR231C-AYOR231C-A 201 nt-3.41□□□□□ -2.96
PKR1Q03880 YKL225WYKL225W 348 nt-3.45□□□□□ -2.96
PKR1Q03880 SPG3YDR504C 384 nt-3.47□□□□□ -2.96
PKR1Q03880 tS(GCU)Q1tS(GCU)Q1 86 nt-3.48□□□□□ -2.97
PKR1Q03880 YCL001W-BYCL001W-B 255 nt-3.58□□□□□ -2.98
PKR1Q03880 snR87snR87 109 nt-3.6□□□□□ -2.99
PKR1Q03880 YHR175W-AYHR175W-A 150 nt-3.63□□□□□ -2.99
PKR1Q03880 tR(ACG)Q2tR(ACG)Q2 74 nt-3.76□□□□□ -3.01
PKR1Q03880 YOL166W-AYOL166W-A 156 nt-3.76□□□□□ -3.01
PKR1Q03880 YDL159W-AYDL159W-A 132 nt-3.78□□□□□ -3.01
PKR1Q03880 YGR122C-AYGR122C-A 129 nt-3.78□□□□□ -3.01
PKR1Q03880 YKL096C-BYKL096C-B 150 nt-3.79□□□□□ -3.02
PKR1Q03880 YNL337WYNL337W 255 nt-3.83□□□□□ -3.02
PKR1Q03880 Q0142Q0142 177 nt-3.86□□□□□ -3.03
PKR1Q03880 YMR046W-AYMR046W-A 129 nt-3.89□□□□□ -3.03
PKR1Q03880 YDR034C-AYDR034C-A 177 nt-3.92□□□□□ -3.04
PKR1Q03880 snR58snR58 96 nt-3.99□□□□□ -3.05
Retrieved 100 of 7,029 protein–RNA pairs in 71.8 ms