Protein–RNA interactions for Protein: P53962

YNL035C, Uncharacterized WD repeat-containing protein YNL035C, yeastyeast

Known RBP Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL035CP53962 YMR160WYMR160W 2451 nt2.1□□□□□ -2.07
YNL035CP53962 SKI3YPR189W 4299 nt2.09□□□□□ -2.07
YNL035CP53962 snR67snR67 82 nt2.08□□□□□ -2.08
YNL035CP53962 NUP192YJL039C 5052 nt2.06□□□□□ -2.08
YNL035CP53962 SWI4YER111C 3282 nt2.04□□□□□ -2.08
YNL035CP53962 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
YNL035CP53962 TRM732YMR259C 4263 nt2□□□□□ -2.09
YNL035CP53962 CLU1YMR012W 3834 nt1.99□□□□□ -2.09
YNL035CP53962 YMR247W-AYMR247W-A 144 nt1.98□□□□□ -2.09
YNL035CP53962 NUP145YGL092W 3954 nt1.98□□□□□ -2.09
YNL035CP53962 USO1YDL058W 5373 nt1.97□□□□□ -2.09
YNL035CP53962 MON2YNL297C 4911 nt1.97□□□□□ -2.09
YNL035CP53962 LAA1YJL207C 6045 nt1.94□□□□□ -2.1
YNL035CP53962 MYO1YHR023W 5787 nt1.93□□□□□ -2.1
YNL035CP53962 NUP188YML103C 4968 nt1.91□□□□□ -2.1
YNL035CP53962 YNL284C-BYNL284C-B 5268 nt1.89□□□□□ -2.11
YNL035CP53962 CDC39YCR093W 6327 nt1.88□□□□□ -2.11
YNL035CP53962 tT(UGU)HtT(UGU)H 72 nt1.86□□□□□ -2.11
YNL035CP53962 MLP2YIL149C 5040 nt1.83□□□□□ -2.12
YNL035CP53962 PEP1YBL017C 4740 nt1.82□□□□□ -2.12
YNL035CP53962 snR77snR77 88 nt1.82□□□□□ -2.12
YNL035CP53962 BRR2YER172C 6492 nt1.82□□□□□ -2.12
YNL035CP53962 YMR272W-BYMR272W-B 108 nt1.8□□□□□ -2.12
YNL035CP53962 VAM6YDL077C 3150 nt1.78□□□□□ -2.12
YNL035CP53962 TMA7YLR262C-A 195 nt1.78□□□□□ -2.12
YNL035CP53962 YGR130CYGR130C 2451 nt1.78□□□□□ -2.12
YNL035CP53962 SSK2YNR031C 4740 nt1.77□□□□□ -2.13
YNL035CP53962 CFT1YDR301W 4074 nt1.73□□□□□ -2.13
YNL035CP53962 tQ(UUG)E2tQ(UUG)E2 72 nt1.73□□□□□ -2.13
YNL035CP53962 YPR117WYPR117W 7470 nt1.73□□□□□ -2.13
YNL035CP53962 SOV1YMR066W 2697 nt1.73□□□□□ -2.13
YNL035CP53962 BST1YFL025C 3090 nt1.72□□□□□ -2.13
YNL035CP53962 SPT7YBR081C 3999 nt1.72□□□□□ -2.13
YNL035CP53962 YOR316C-AYOR316C-A 210 nt1.7□□□□□ -2.14
YNL035CP53962 YOR192C-BYOR192C-B 5313 nt1.64□□□□□ -2.15
YNL035CP53962 MEC1YBR136W 7107 nt1.63□□□□□ -2.15
YNL035CP53962 SBH2YER019C-A 267 nt1.61□□□□□ -2.15
YNL035CP53962 IRA1YBR140C 9279 nt1.58□□□□□ -2.16
YNL035CP53962 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
YNL035CP53962 BUD3YCL014W 4911 nt1.52□□□□□ -2.17
YNL035CP53962 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
YNL035CP53962 PAU24YBR301W 363 nt1.5□□□□□ -2.17
YNL035CP53962 RKR1YMR247C 4689 nt1.48□□□□□ -2.17
YNL035CP53962 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
YNL035CP53962 IML1YJR138W 4755 nt1.47□□□□□ -2.17
YNL035CP53962 BEM2YER155C 6504 nt1.42□□□□□ -2.18
YNL035CP53962 tV(UAC)BtV(UAC)B 74 nt1.42□□□□□ -2.18
YNL035CP53962 tV(UAC)DtV(UAC)D 74 nt1.42□□□□□ -2.18
YNL035CP53962 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
YNL035CP53962 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
YNL035CP53962 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
YNL035CP53962 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
YNL035CP53962 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
YNL035CP53962 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
YNL035CP53962 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
YNL035CP53962 DOP1YDR141C 5097 nt1.41□□□□□ -2.18
YNL035CP53962 SCC2YDR180W 4482 nt1.38□□□□□ -2.19
YNL035CP53962 YBL100W-BYBL100W-B 5313 nt1.38□□□□□ -2.19
YNL035CP53962 LTE1YAL024C 4308 nt1.38□□□□□ -2.19
YNL035CP53962 tC(GCA)QtC(GCA)Q 76 nt1.36□□□□□ -2.19
YNL035CP53962 YML100W-AYML100W-A 174 nt1.35□□□□□ -2.19
YNL035CP53962 tF(GAA)BtF(GAA)B 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)FtF(GAA)F 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)GtF(GAA)G 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)H1tF(GAA)H1 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)H2tF(GAA)H2 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)MtF(GAA)M 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)P1tF(GAA)P1 73 nt1.25□□□□□ -2.21
YNL035CP53962 tF(GAA)P2tF(GAA)P2 73 nt1.25□□□□□ -2.21
YNL035CP53962 THO2YNL139C 4794 nt1.25□□□□□ -2.21
YNL035CP53962 UTP20YBL004W 7482 nt1.23□□□□□ -2.21
YNL035CP53962 RPL41BYDL133C-A 78 nt1.17□□□□□ -2.22
YNL035CP53962 ESP1YGR098C 4893 nt1.16□□□□□ -2.22
YNL035CP53962 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
YNL035CP53962 YKL145W-AYKL145W-A 93 nt1.12□□□□□ -2.23
YNL035CP53962 YOL014WYOL014W 375 nt1.12□□□□□ -2.23
YNL035CP53962 YOR335W-AYOR335W-A 81 nt1.08□□□□□ -2.24
YNL035CP53962 YJL113WYJL113W 4647 nt1.06□□□□□ -2.24
YNL035CP53962 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
YNL035CP53962 YOR186C-AYOR186C-A 210 nt1.04□□□□□ -2.24
YNL035CP53962 MLP1YKR095W 5628 nt1.04□□□□□ -2.24
YNL035CP53962 FMP27YLR454W 7887 nt1.01□□□□□ -2.25
YNL035CP53962 PAU9YBL108C-A 129 nt1□□□□□ -2.25
YNL035CP53962 snR6snR6 112 nt0.99□□□□□ -2.25
YNL035CP53962 snR58snR58 96 nt0.97□□□□□ -2.25
YNL035CP53962 IQG1YPL242C 4488 nt0.9□□□□□ -2.26
YNL035CP53962 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
YNL035CP53962 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
YNL035CP53962 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
YNL035CP53962 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
YNL035CP53962 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
YNL035CP53962 YMR272W-AYMR272W-A 114 nt0.85□□□□□ -2.27
YNL035CP53962 snR73snR73 106 nt0.81□□□□□ -2.28
YNL035CP53962 snR161snR161 161 nt0.77□□□□□ -2.29
YNL035CP53962 snR128snR128 126 nt0.74□□□□□ -2.29
YNL035CP53962 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
YNL035CP53962 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
YNL035CP53962 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
YNL035CP53962 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
YNL035CP53962 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms