Protein–RNA interactions for Protein: P53012

SCS3, FIT family protein SCS3, yeastyeast

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCS3P53012 APL3YBL037W 3078 nt1.14□□□□□ -2.23
SCS3P53012 CDC39YCR093W 6327 nt1.14□□□□□ -2.23
SCS3P53012 YKL096C-BYKL096C-B 150 nt1.14□□□□□ -2.23
SCS3P53012 snR38snR38 95 nt1.14□□□□□ -2.23
SCS3P53012 YPR160W-AYPR160W-A 81 nt1.13□□□□□ -2.23
SCS3P53012 SEC3YER008C 4011 nt1.13□□□□□ -2.23
SCS3P53012 MSN5YDR335W 3675 nt1.12□□□□□ -2.23
SCS3P53012 YPL060C-AYPL060C-A 3315 nt1.12□□□□□ -2.23
SCS3P53012 BEM3YPL115C 3387 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)BtF(GAA)B 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)FtF(GAA)F 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)GtF(GAA)G 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)H1tF(GAA)H1 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)H2tF(GAA)H2 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)MtF(GAA)M 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)P1tF(GAA)P1 73 nt1.12□□□□□ -2.23
SCS3P53012 tF(GAA)P2tF(GAA)P2 73 nt1.12□□□□□ -2.23
SCS3P53012 AI1Q0050 2505 nt1.12□□□□□ -2.23
SCS3P53012 snR75snR75 89 nt1.11□□□□□ -2.23
SCS3P53012 YDL159C-BYDL159C-B 177 nt1.1□□□□□ -2.23
SCS3P53012 ULP2YIL031W 3105 nt1.09□□□□□ -2.23
SCS3P53012 snR69snR69 101 nt1.09□□□□□ -2.23
SCS3P53012 PRP16YKR086W 3216 nt1.09□□□□□ -2.24
SCS3P53012 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
SCS3P53012 YML054C-AYML054C-A 159 nt1.08□□□□□ -2.24
SCS3P53012 NST1YNL091W 3723 nt1.07□□□□□ -2.24
SCS3P53012 CSE1YGL238W 2883 nt1.07□□□□□ -2.24
SCS3P53012 RPL41AYDL184C 78 nt1.06□□□□□ -2.24
SCS3P53012 NUP145YGL092W 3954 nt1.06□□□□□ -2.24
SCS3P53012 CLU1YMR012W 3834 nt1.05□□□□□ -2.24
SCS3P53012 BUD3YCL014W 4911 nt1.05□□□□□ -2.24
SCS3P53012 YHR180C-BYHR180C-B 105 nt1.05□□□□□ -2.24
SCS3P53012 YLR399W-AYLR399W-A 105 nt1.05□□□□□ -2.24
SCS3P53012 YNL054W-BYNL054W-B 5250 nt1.05□□□□□ -2.24
SCS3P53012 NIP1YMR309C 2439 nt1.04□□□□□ -2.24
SCS3P53012 YSP1YHR155W 3687 nt1.03□□□□□ -2.24
SCS3P53012 RDS3YPR094W 324 nt1.03□□□□□ -2.24
SCS3P53012 YBR296C-AYBR296C-A 120 nt1.03□□□□□ -2.24
SCS3P53012 SKI7YOR076C 2244 nt1.03□□□□□ -2.25
SCS3P53012 YGR122C-AYGR122C-A 129 nt1.01□□□□□ -2.25
SCS3P53012 YPR117WYPR117W 7470 nt1□□□□□ -2.25
SCS3P53012 SPT7YBR081C 3999 nt1□□□□□ -2.25
SCS3P53012 VAM6YDL077C 3150 nt0.98□□□□□ -2.25
SCS3P53012 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
SCS3P53012 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
SCS3P53012 YOL014WYOL014W 375 nt0.96□□□□□ -2.26
SCS3P53012 BUL2YML111W 2763 nt0.94□□□□□ -2.26
SCS3P53012 YLL006W-AYLL006W-A 177 nt0.94□□□□□ -2.26
SCS3P53012 tQ(UUG)QtQ(UUG)Q 76 nt0.91□□□□□ -2.26
SCS3P53012 PET111YMR257C 2403 nt0.9□□□□□ -2.26
SCS3P53012 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
SCS3P53012 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
SCS3P53012 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
SCS3P53012 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
SCS3P53012 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
SCS3P53012 YJL077W-AYJL077W-A 87 nt0.9□□□□□ -2.27
SCS3P53012 SCC2YDR180W 4482 nt0.9□□□□□ -2.27
SCS3P53012 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
SCS3P53012 YMR160WYMR160W 2451 nt0.87□□□□□ -2.27
SCS3P53012 YER090C-AYER090C-A 90 nt0.87□□□□□ -2.27
SCS3P53012 UTP20YBL004W 7482 nt0.87□□□□□ -2.27
SCS3P53012 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
SCS3P53012 YKL145W-AYKL145W-A 93 nt0.85□□□□□ -2.27
SCS3P53012 YOR192C-BYOR192C-B 5313 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)BtT(AGU)B 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)CtT(AGU)C 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)DtT(AGU)D 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)HtT(AGU)H 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)I1tT(AGU)I1 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)I2tT(AGU)I2 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)JtT(AGU)J 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)N1tT(AGU)N1 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)N2tT(AGU)N2 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)O1tT(AGU)O1 73 nt0.83□□□□□ -2.28
SCS3P53012 tT(AGU)O2tT(AGU)O2 73 nt0.83□□□□□ -2.28
SCS3P53012 snR67snR67 82 nt0.73□□□□□ -2.29
SCS3P53012 tV(UAC)QtV(UAC)Q 76 nt0.71□□□□□ -2.3
SCS3P53012 YDL114W-AYDL114W-A 114 nt0.7□□□□□ -2.3
SCS3P53012 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
SCS3P53012 MLP2YIL149C 5040 nt0.69□□□□□ -2.3
SCS3P53012 YOR376W-AYOR376W-A 156 nt0.68□□□□□ -2.3
SCS3P53012 YKL106C-AYKL106C-A 120 nt0.66□□□□□ -2.3
SCS3P53012 YBL100W-BYBL100W-B 5313 nt0.65□□□□□ -2.31
SCS3P53012 LTE1YAL024C 4308 nt0.64□□□□□ -2.31
SCS3P53012 THO2YNL139C 4794 nt0.6□□□□□ -2.31
SCS3P53012 YMR272W-AYMR272W-A 114 nt0.58□□□□□ -2.32
SCS3P53012 YPR159C-AYPR159C-A 102 nt0.56□□□□□ -2.32
SCS3P53012 snR40snR40 97 nt0.55□□□□□ -2.32
SCS3P53012 IQG1YPL242C 4488 nt0.51□□□□□ -2.33
SCS3P53012 YML100W-AYML100W-A 174 nt0.51□□□□□ -2.33
SCS3P53012 UTP10YJL109C 5310 nt0.5□□□□□ -2.33
SCS3P53012 snR77snR77 88 nt0.48□□□□□ -2.33
SCS3P53012 YOR316C-AYOR316C-A 210 nt0.48□□□□□ -2.33
SCS3P53012 SOV1YMR066W 2697 nt0.46□□□□□ -2.34
SCS3P53012 SBH2YER019C-A 267 nt0.4□□□□□ -2.35
SCS3P53012 YOR186C-AYOR186C-A 210 nt0.4□□□□□ -2.35
SCS3P53012 MLP1YKR095W 5628 nt0.39□□□□□ -2.35
SCS3P53012 ESP1YGR098C 4893 nt0.36□□□□□ -2.35
SCS3P53012 PAU9YBL108C-A 129 nt0.3□□□□□ -2.36
SCS3P53012 snR128snR128 126 nt0.28□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms