Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
CTH1P47976 YGR122C-AYGR122C-A 129 nt1.66□□□□□ -2.14
CTH1P47976 YBR296C-AYBR296C-A 120 nt1.66□□□□□ -2.14
CTH1P47976 KAP122YGL016W 3246 nt1.66□□□□□ -2.14
CTH1P47976 APL3YBL037W 3078 nt1.65□□□□□ -2.15
CTH1P47976 snR69snR69 101 nt1.65□□□□□ -2.15
CTH1P47976 PET127YOR017W 2403 nt1.64□□□□□ -2.15
CTH1P47976 TMA7YLR262C-A 195 nt1.63□□□□□ -2.15
CTH1P47976 tN(GUU)QtN(GUU)Q 71 nt1.62□□□□□ -2.15
CTH1P47976 YOL014WYOL014W 375 nt1.62□□□□□ -2.15
CTH1P47976 SEC8YPR055W 3198 nt1.62□□□□□ -2.15
CTH1P47976 RDS3YPR094W 324 nt1.61□□□□□ -2.15
CTH1P47976 snR38snR38 95 nt1.61□□□□□ -2.15
CTH1P47976 CSE1YGL238W 2883 nt1.6□□□□□ -2.15
CTH1P47976 UTP20YBL004W 7482 nt1.6□□□□□ -2.15
CTH1P47976 AI1Q0050 2505 nt1.6□□□□□ -2.15
CTH1P47976 IRA1YBR140C 9279 nt1.59□□□□□ -2.15
CTH1P47976 SEC3YER008C 4011 nt1.59□□□□□ -2.16
CTH1P47976 YSP1YHR155W 3687 nt1.58□□□□□ -2.16
CTH1P47976 YLR399W-AYLR399W-A 105 nt1.57□□□□□ -2.16
CTH1P47976 MON2YNL297C 4911 nt1.57□□□□□ -2.16
CTH1P47976 SWI4YER111C 3282 nt1.56□□□□□ -2.16
CTH1P47976 ULP2YIL031W 3105 nt1.56□□□□□ -2.16
CTH1P47976 SIP4YJL089W 2490 nt1.55□□□□□ -2.16
CTH1P47976 tV(UAC)BtV(UAC)B 74 nt1.55□□□□□ -2.16
CTH1P47976 tV(UAC)DtV(UAC)D 74 nt1.55□□□□□ -2.16
CTH1P47976 NIP1YMR309C 2439 nt1.55□□□□□ -2.16
CTH1P47976 DOP1YDR141C 5097 nt1.52□□□□□ -2.17
CTH1P47976 YNL284C-BYNL284C-B 5268 nt1.51□□□□□ -2.17
CTH1P47976 BST1YFL025C 3090 nt1.49□□□□□ -2.17
CTH1P47976 VPS15YBR097W 4365 nt1.48□□□□□ -2.17
CTH1P47976 YPR117WYPR117W 7470 nt1.48□□□□□ -2.17
CTH1P47976 MSN5YDR335W 3675 nt1.47□□□□□ -2.17
CTH1P47976 YJL077W-AYJL077W-A 87 nt1.47□□□□□ -2.17
CTH1P47976 PET111YMR257C 2403 nt1.46□□□□□ -2.18
CTH1P47976 tQ(UUG)QtQ(UUG)Q 76 nt1.46□□□□□ -2.18
CTH1P47976 SPC110YDR356W 2835 nt1.44□□□□□ -2.18
CTH1P47976 HKR1YDR420W 5409 nt1.43□□□□□ -2.18
CTH1P47976 BUL2YML111W 2763 nt1.43□□□□□ -2.18
CTH1P47976 NUP188YML103C 4968 nt1.41□□□□□ -2.18
CTH1P47976 EST2YLR318W 2655 nt1.41□□□□□ -2.18
CTH1P47976 YLL006W-AYLL006W-A 177 nt1.4□□□□□ -2.19
CTH1P47976 NST1YNL091W 3723 nt1.35□□□□□ -2.19
CTH1P47976 CDC39YCR093W 6327 nt1.35□□□□□ -2.19
CTH1P47976 YER090C-AYER090C-A 90 nt1.29□□□□□ -2.2
CTH1P47976 YPL060C-AYPL060C-A 3315 nt1.29□□□□□ -2.2
CTH1P47976 YKL145W-AYKL145W-A 93 nt1.28□□□□□ -2.2
CTH1P47976 BEM2YER155C 6504 nt1.25□□□□□ -2.21
CTH1P47976 YMR160WYMR160W 2451 nt1.24□□□□□ -2.21
CTH1P47976 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
CTH1P47976 snR67snR67 82 nt1.21□□□□□ -2.22
CTH1P47976 MYO1YHR023W 5787 nt1.21□□□□□ -2.22
CTH1P47976 YDL114W-AYDL114W-A 114 nt1.2□□□□□ -2.22
CTH1P47976 YOR376W-AYOR376W-A 156 nt1.15□□□□□ -2.23
CTH1P47976 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
CTH1P47976 YNL054W-BYNL054W-B 5250 nt1.13□□□□□ -2.23
CTH1P47976 YOR192C-BYOR192C-B 5313 nt1.13□□□□□ -2.23
CTH1P47976 YKL106C-AYKL106C-A 120 nt1.13□□□□□ -2.23
CTH1P47976 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
CTH1P47976 RKR1YMR247C 4689 nt1.06□□□□□ -2.24
CTH1P47976 BUD3YCL014W 4911 nt1.05□□□□□ -2.24
CTH1P47976 LTE1YAL024C 4308 nt1.05□□□□□ -2.24
CTH1P47976 tV(UAC)QtV(UAC)Q 76 nt1.05□□□□□ -2.24
CTH1P47976 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
CTH1P47976 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
CTH1P47976 snR40snR40 97 nt1.01□□□□□ -2.25
CTH1P47976 tT(AGU)BtT(AGU)B 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)CtT(AGU)C 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)DtT(AGU)D 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)HtT(AGU)H 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)I1tT(AGU)I1 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)I2tT(AGU)I2 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)JtT(AGU)J 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)N1tT(AGU)N1 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)N2tT(AGU)N2 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)O1tT(AGU)O1 73 nt0.99□□□□□ -2.25
CTH1P47976 tT(AGU)O2tT(AGU)O2 73 nt0.99□□□□□ -2.25
CTH1P47976 FMP27YLR454W 7887 nt0.98□□□□□ -2.25
CTH1P47976 MLP2YIL149C 5040 nt0.97□□□□□ -2.25
CTH1P47976 THO2YNL139C 4794 nt0.89□□□□□ -2.27
CTH1P47976 IQG1YPL242C 4488 nt0.87□□□□□ -2.27
CTH1P47976 EMT1tM(CAU)D 73 nt0.84□□□□□ -2.27
CTH1P47976 EMT5tM(CAU)J1 73 nt0.84□□□□□ -2.27
CTH1P47976 EMT3tM(CAU)J2 73 nt0.84□□□□□ -2.27
CTH1P47976 EMT4tM(CAU)M 73 nt0.84□□□□□ -2.27
CTH1P47976 EMT2tM(CAU)O2 73 nt0.84□□□□□ -2.27
CTH1P47976 MLP1YKR095W 5628 nt0.83□□□□□ -2.28
CTH1P47976 YBL100W-BYBL100W-B 5313 nt0.82□□□□□ -2.28
CTH1P47976 snR77snR77 88 nt0.82□□□□□ -2.28
CTH1P47976 YOR316C-AYOR316C-A 210 nt0.78□□□□□ -2.28
CTH1P47976 SBH2YER019C-A 267 nt0.75□□□□□ -2.29
CTH1P47976 YML100W-AYML100W-A 174 nt0.73□□□□□ -2.29
CTH1P47976 YOR186C-AYOR186C-A 210 nt0.72□□□□□ -2.29
CTH1P47976 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
CTH1P47976 YJL113WYJL113W 4647 nt0.65□□□□□ -2.31
CTH1P47976 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
CTH1P47976 PAU9YBL108C-A 129 nt0.61□□□□□ -2.31
CTH1P47976 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
CTH1P47976 SOV1YMR066W 2697 nt0.55□□□□□ -2.32
CTH1P47976 ESP1YGR098C 4893 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms