Protein–RNA interactions for Protein: P40454

RRD1, Serine/threonine-protein phosphatase 2A activator 1, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRD1P40454 YSP1YHR155W 3687 nt2.01□□□□□ -2.09
RRD1P40454 CDC25YLR310C 4770 nt2.01□□□□□ -2.09
RRD1P40454 ATG9YDL149W 2994 nt2□□□□□ -2.09
RRD1P40454 YLR399W-AYLR399W-A 105 nt1.99□□□□□ -2.09
RRD1P40454 CAT8YMR280C 4302 nt1.98□□□□□ -2.09
RRD1P40454 SWI4YER111C 3282 nt1.93□□□□□ -2.1
RRD1P40454 NST1YNL091W 3723 nt1.93□□□□□ -2.1
RRD1P40454 MSH3YCR092C 3057 nt1.93□□□□□ -2.1
RRD1P40454 UBP2YOR124C 3819 nt1.9□□□□□ -2.1
RRD1P40454 DGR1YNL130C-A 147 nt1.9□□□□□ -2.11
RRD1P40454 YPL060C-AYPL060C-A 3315 nt1.89□□□□□ -2.11
RRD1P40454 YOR376W-AYOR376W-A 156 nt1.89□□□□□ -2.11
RRD1P40454 SPP41YDR464W 4308 nt1.89□□□□□ -2.11
RRD1P40454 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
RRD1P40454 SIP4YJL089W 2490 nt1.88□□□□□ -2.11
RRD1P40454 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
RRD1P40454 YJL077W-AYJL077W-A 87 nt1.87□□□□□ -2.11
RRD1P40454 TRM732YMR259C 4263 nt1.84□□□□□ -2.12
RRD1P40454 LAA1YJL207C 6045 nt1.83□□□□□ -2.12
RRD1P40454 CFT1YDR301W 4074 nt1.83□□□□□ -2.12
RRD1P40454 IML1YJR138W 4755 nt1.83□□□□□ -2.12
RRD1P40454 UTP20YBL004W 7482 nt1.83□□□□□ -2.12
RRD1P40454 BUL2YML111W 2763 nt1.82□□□□□ -2.12
RRD1P40454 NUP188YML103C 4968 nt1.82□□□□□ -2.12
RRD1P40454 tQ(UUG)QtQ(UUG)Q 76 nt1.82□□□□□ -2.12
RRD1P40454 MYO1YHR023W 5787 nt1.81□□□□□ -2.12
RRD1P40454 TMA7YLR262C-A 195 nt1.81□□□□□ -2.12
RRD1P40454 YDL114W-AYDL114W-A 114 nt1.77□□□□□ -2.13
RRD1P40454 BST1YFL025C 3090 nt1.76□□□□□ -2.13
RRD1P40454 NEO1YIL048W 3456 nt1.76□□□□□ -2.13
RRD1P40454 YLL006W-AYLL006W-A 177 nt1.76□□□□□ -2.13
RRD1P40454 CDC39YCR093W 6327 nt1.75□□□□□ -2.13
RRD1P40454 tH(GUG)E1tH(GUG)E1 72 nt1.71□□□□□ -2.14
RRD1P40454 tH(GUG)E2tH(GUG)E2 72 nt1.71□□□□□ -2.14
RRD1P40454 tH(GUG)G1tH(GUG)G1 72 nt1.71□□□□□ -2.14
RRD1P40454 tH(GUG)G2tH(GUG)G2 72 nt1.71□□□□□ -2.14
RRD1P40454 tH(GUG)HtH(GUG)H 72 nt1.71□□□□□ -2.14
RRD1P40454 tH(GUG)KtH(GUG)K 72 nt1.71□□□□□ -2.14
RRD1P40454 tH(GUG)MtH(GUG)M 72 nt1.71□□□□□ -2.14
RRD1P40454 YER090C-AYER090C-A 90 nt1.71□□□□□ -2.14
RRD1P40454 snR40snR40 97 nt1.7□□□□□ -2.14
RRD1P40454 tV(UAC)BtV(UAC)B 74 nt1.69□□□□□ -2.14
RRD1P40454 tV(UAC)DtV(UAC)D 74 nt1.69□□□□□ -2.14
RRD1P40454 tV(UAC)QtV(UAC)Q 76 nt1.67□□□□□ -2.14
RRD1P40454 YMR247W-AYMR247W-A 144 nt1.66□□□□□ -2.14
RRD1P40454 YKL145W-AYKL145W-A 93 nt1.65□□□□□ -2.15
RRD1P40454 tT(UGU)HtT(UGU)H 72 nt1.63□□□□□ -2.15
RRD1P40454 YNL054W-BYNL054W-B 5250 nt1.61□□□□□ -2.15
RRD1P40454 snR67snR67 82 nt1.6□□□□□ -2.15
RRD1P40454 YKL106C-AYKL106C-A 120 nt1.59□□□□□ -2.15
RRD1P40454 HKR1YDR420W 5409 nt1.58□□□□□ -2.16
RRD1P40454 SPT7YBR081C 3999 nt1.53□□□□□ -2.17
RRD1P40454 YMR160WYMR160W 2451 nt1.5□□□□□ -2.17
RRD1P40454 BUD3YCL014W 4911 nt1.47□□□□□ -2.17
RRD1P40454 MEC1YBR136W 7107 nt1.43□□□□□ -2.18
RRD1P40454 VAM6YDL077C 3150 nt1.4□□□□□ -2.19
RRD1P40454 YOR192C-BYOR192C-B 5313 nt1.39□□□□□ -2.19
RRD1P40454 MLP2YIL149C 5040 nt1.38□□□□□ -2.19
RRD1P40454 IRA1YBR140C 9279 nt1.37□□□□□ -2.19
RRD1P40454 tQ(UUG)E2tQ(UUG)E2 72 nt1.35□□□□□ -2.19
RRD1P40454 YJR029WYJR029W 5268 nt1.35□□□□□ -2.19
RRD1P40454 YPR137C-BYPR137C-B 5268 nt1.35□□□□□ -2.19
RRD1P40454 RKR1YMR247C 4689 nt1.34□□□□□ -2.2
RRD1P40454 YPR117WYPR117W 7470 nt1.32□□□□□ -2.2
RRD1P40454 snR77snR77 88 nt1.27□□□□□ -2.21
RRD1P40454 YOR316C-AYOR316C-A 210 nt1.21□□□□□ -2.22
RRD1P40454 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
RRD1P40454 LTE1YAL024C 4308 nt1.17□□□□□ -2.22
RRD1P40454 THO2YNL139C 4794 nt1.16□□□□□ -2.22
RRD1P40454 SBH2YER019C-A 267 nt1.13□□□□□ -2.23
RRD1P40454 SOV1YMR066W 2697 nt1.11□□□□□ -2.23
RRD1P40454 YBL100W-BYBL100W-B 5313 nt1.1□□□□□ -2.23
RRD1P40454 BEM2YER155C 6504 nt1.07□□□□□ -2.24
RRD1P40454 YML100W-AYML100W-A 174 nt1.02□□□□□ -2.25
RRD1P40454 MLP1YKR095W 5628 nt0.98□□□□□ -2.25
RRD1P40454 IQG1YPL242C 4488 nt0.91□□□□□ -2.26
RRD1P40454 YOR186C-AYOR186C-A 210 nt0.88□□□□□ -2.27
RRD1P40454 EMT1tM(CAU)D 73 nt0.86□□□□□ -2.27
RRD1P40454 EMT5tM(CAU)J1 73 nt0.86□□□□□ -2.27
RRD1P40454 EMT3tM(CAU)J2 73 nt0.86□□□□□ -2.27
RRD1P40454 EMT4tM(CAU)M 73 nt0.86□□□□□ -2.27
RRD1P40454 EMT2tM(CAU)O2 73 nt0.86□□□□□ -2.27
RRD1P40454 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
RRD1P40454 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
RRD1P40454 FMP27YLR454W 7887 nt0.83□□□□□ -2.28
RRD1P40454 ESP1YGR098C 4893 nt0.81□□□□□ -2.28
RRD1P40454 PAU9YBL108C-A 129 nt0.75□□□□□ -2.29
RRD1P40454 tC(GCA)QtC(GCA)Q 76 nt0.74□□□□□ -2.29
RRD1P40454 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
RRD1P40454 UTP10YJL109C 5310 nt0.68□□□□□ -2.3
RRD1P40454 YOR335W-AYOR335W-A 81 nt0.65□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms