Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 ROM2YLR371W 4071 nt1.47□□□□□ -2.17
UBP5P39944 YSP1YHR155W 3687 nt1.47□□□□□ -2.17
UBP5P39944 SEC3YER008C 4011 nt1.46□□□□□ -2.18
UBP5P39944 YLR399W-AYLR399W-A 105 nt1.46□□□□□ -2.18
UBP5P39944 CCH1YGR217W 6120 nt1.45□□□□□ -2.18
UBP5P39944 KCS1YDR017C 3153 nt1.45□□□□□ -2.18
UBP5P39944 SKI3YPR189W 4299 nt1.44□□□□□ -2.18
UBP5P39944 APL3YBL037W 3078 nt1.44□□□□□ -2.18
UBP5P39944 YNL054W-BYNL054W-B 5250 nt1.43□□□□□ -2.18
UBP5P39944 NST1YNL091W 3723 nt1.42□□□□□ -2.18
UBP5P39944 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
UBP5P39944 CLU1YMR012W 3834 nt1.41□□□□□ -2.18
UBP5P39944 FYV8YGR196C 2454 nt1.4□□□□□ -2.19
UBP5P39944 IML1YJR138W 4755 nt1.39□□□□□ -2.19
UBP5P39944 BUL2YML111W 2763 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)E1tH(GUG)E1 72 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)E2tH(GUG)E2 72 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)G1tH(GUG)G1 72 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)G2tH(GUG)G2 72 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)HtH(GUG)H 72 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)KtH(GUG)K 72 nt1.39□□□□□ -2.19
UBP5P39944 tH(GUG)MtH(GUG)M 72 nt1.39□□□□□ -2.19
UBP5P39944 NUP188YML103C 4968 nt1.39□□□□□ -2.19
UBP5P39944 SWI4YER111C 3282 nt1.39□□□□□ -2.19
UBP5P39944 SIP4YJL089W 2490 nt1.38□□□□□ -2.19
UBP5P39944 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
UBP5P39944 tQ(UUG)QtQ(UUG)Q 76 nt1.37□□□□□ -2.19
UBP5P39944 YJL077W-AYJL077W-A 87 nt1.37□□□□□ -2.19
UBP5P39944 MSN5YDR335W 3675 nt1.37□□□□□ -2.19
UBP5P39944 CDC39YCR093W 6327 nt1.36□□□□□ -2.19
UBP5P39944 YCS4YLR272C 3531 nt1.35□□□□□ -2.19
UBP5P39944 YOR376W-AYOR376W-A 156 nt1.34□□□□□ -2.19
UBP5P39944 YLL006W-AYLL006W-A 177 nt1.31□□□□□ -2.2
UBP5P39944 BEM2YER155C 6504 nt1.3□□□□□ -2.2
UBP5P39944 BUD3YCL014W 4911 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)BtF(GAA)B 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)FtF(GAA)F 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)GtF(GAA)G 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)H1tF(GAA)H1 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)H2tF(GAA)H2 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)MtF(GAA)M 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)P1tF(GAA)P1 73 nt1.28□□□□□ -2.2
UBP5P39944 tF(GAA)P2tF(GAA)P2 73 nt1.28□□□□□ -2.2
UBP5P39944 YER090C-AYER090C-A 90 nt1.28□□□□□ -2.2
UBP5P39944 YDL114W-AYDL114W-A 114 nt1.27□□□□□ -2.21
UBP5P39944 DOP1YDR141C 5097 nt1.26□□□□□ -2.21
UBP5P39944 tV(UAC)BtV(UAC)B 74 nt1.25□□□□□ -2.21
UBP5P39944 tV(UAC)DtV(UAC)D 74 nt1.25□□□□□ -2.21
UBP5P39944 tV(UAC)QtV(UAC)Q 76 nt1.22□□□□□ -2.21
UBP5P39944 YPR117WYPR117W 7470 nt1.22□□□□□ -2.21
UBP5P39944 BST1YFL025C 3090 nt1.22□□□□□ -2.21
UBP5P39944 snR67snR67 82 nt1.19□□□□□ -2.22
UBP5P39944 snR40snR40 97 nt1.18□□□□□ -2.22
UBP5P39944 SPT7YBR081C 3999 nt1.17□□□□□ -2.22
UBP5P39944 YKL106C-AYKL106C-A 120 nt1.16□□□□□ -2.22
UBP5P39944 YOR192C-BYOR192C-B 5313 nt1.14□□□□□ -2.23
UBP5P39944 YOL014WYOL014W 375 nt1.13□□□□□ -2.23
UBP5P39944 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
UBP5P39944 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
UBP5P39944 YMR160WYMR160W 2451 nt1.09□□□□□ -2.23
UBP5P39944 VAM6YDL077C 3150 nt1.09□□□□□ -2.24
UBP5P39944 UTP20YBL004W 7482 nt1.09□□□□□ -2.24
UBP5P39944 MLP2YIL149C 5040 nt1.04□□□□□ -2.24
UBP5P39944 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
UBP5P39944 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
UBP5P39944 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
UBP5P39944 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
UBP5P39944 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
UBP5P39944 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
UBP5P39944 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
UBP5P39944 THO2YNL139C 4794 nt0.93□□□□□ -2.26
UBP5P39944 YKL145W-AYKL145W-A 93 nt0.93□□□□□ -2.26
UBP5P39944 snR77snR77 88 nt0.91□□□□□ -2.26
UBP5P39944 LTE1YAL024C 4308 nt0.87□□□□□ -2.27
UBP5P39944 YBL100W-BYBL100W-B 5313 nt0.87□□□□□ -2.27
UBP5P39944 YOR316C-AYOR316C-A 210 nt0.84□□□□□ -2.27
UBP5P39944 SOV1YMR066W 2697 nt0.84□□□□□ -2.28
UBP5P39944 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
UBP5P39944 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
UBP5P39944 SBH2YER019C-A 267 nt0.79□□□□□ -2.28
UBP5P39944 YML100W-AYML100W-A 174 nt0.78□□□□□ -2.28
UBP5P39944 IQG1YPL242C 4488 nt0.69□□□□□ -2.3
UBP5P39944 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
UBP5P39944 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
UBP5P39944 YOR186C-AYOR186C-A 210 nt0.61□□□□□ -2.31
UBP5P39944 ESP1YGR098C 4893 nt0.6□□□□□ -2.31
UBP5P39944 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
UBP5P39944 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
UBP5P39944 MLP1YKR095W 5628 nt0.56□□□□□ -2.32
UBP5P39944 PAU9YBL108C-A 129 nt0.55□□□□□ -2.32
UBP5P39944 YOR335W-AYOR335W-A 81 nt0.47□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms