Protein–RNA interactions for Protein: P38956

SNF11, Transcription regulatory protein SNF11, yeastyeast

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF11P38956 YFL019CYFL019C 354 nt-2.19□□□□□ -2.76
SNF11P38956 tD(GUC)QtD(GUC)Q 75 nt-2.2□□□□□ -2.76
SNF11P38956 YLR286W-AYLR286W-A 135 nt-2.2□□□□□ -2.76
SNF11P38956 YOR309CYOR309C 381 nt-2.21□□□□□ -2.76
SNF11P38956 YMR172C-AYMR172C-A 384 nt-2.25□□□□□ -2.77
SNF11P38956 YGR035CYGR035C 351 nt-2.26□□□□□ -2.77
SNF11P38956 YAL063C-AYAL063C-A 291 nt-2.26□□□□□ -2.77
SNF11P38956 YEL014CYEL014C 306 nt-2.29□□□□□ -2.78
SNF11P38956 YBR178WYBR178W 375 nt-2.29□□□□□ -2.78
SNF11P38956 YDL159C-BYDL159C-B 177 nt-2.3□□□□□ -2.78
SNF11P38956 snR78snR78 87 nt-2.34□□□□□ -2.78
SNF11P38956 YBR182C-AYBR182C-A 195 nt-2.35□□□□□ -2.79
SNF11P38956 YAL068W-AYAL068W-A 255 nt-2.37□□□□□ -2.79
SNF11P38956 YOR329W-AYOR329W-A 210 nt-2.38□□□□□ -2.79
SNF11P38956 YDR183C-AYDR183C-A 258 nt-2.43□□□□□ -2.8
SNF11P38956 YAL016C-BYAL016C-B 186 nt-2.43□□□□□ -2.8
SNF11P38956 YOR376W-AYOR376W-A 156 nt-2.43□□□□□ -2.8
SNF11P38956 YEL050W-AYEL050W-A 192 nt-2.48□□□□□ -2.81
SNF11P38956 YJR157WYJR157W 363 nt-2.49□□□□□ -2.81
SNF11P38956 YBR131C-AYBR131C-A 90 nt-2.51□□□□□ -2.81
SNF11P38956 YDR524W-CYDR524W-C 90 nt-2.55□□□□□ -2.82
SNF11P38956 YLR299C-AYLR299C-A 93 nt-2.56□□□□□ -2.82
SNF11P38956 YOL083C-AYOL083C-A 141 nt-2.56□□□□□ -2.82
SNF11P38956 YBR196C-AYBR196C-A 150 nt-2.56□□□□□ -2.82
SNF11P38956 tF(GAA)QtF(GAA)Q 75 nt-2.59□□□□□ -2.82
SNF11P38956 YER181CYER181C 324 nt-2.59□□□□□ -2.82
SNF11P38956 YLR342W-AYLR342W-A 174 nt-2.61□□□□□ -2.83
SNF11P38956 YLR222C-AYLR222C-A 231 nt-2.64□□□□□ -2.83
SNF11P38956 YDR543CYDR543C 300 nt-2.65□□□□□ -2.83
SNF11P38956 YPL038W-AYPL038W-A 192 nt-2.65□□□□□ -2.83
SNF11P38956 YOR102WYOR102W 351 nt-2.68□□□□□ -2.84
SNF11P38956 YPR197CYPR197C 564 nt-2.68□□□□□ -2.84
SNF11P38956 YOR316C-AYOR316C-A 210 nt-2.71□□□□□ -2.84
SNF11P38956 YDR413CYDR413C 576 nt-2.73□□□□□ -2.85
SNF11P38956 YGL188C-AYGL188C-A 141 nt-2.75□□□□□ -2.85
SNF11P38956 snR48snR48 113 nt-2.76□□□□□ -2.85
SNF11P38956 YPR012WYPR012W 255 nt-2.77□□□□□ -2.85
SNF11P38956 snR55snR55 98 nt-2.78□□□□□ -2.85
SNF11P38956 RPL39YJL189W 156 nt-2.78□□□□□ -2.85
SNF11P38956 YHR180C-BYHR180C-B 105 nt-2.79□□□□□ -2.86
SNF11P38956 YNL097C-BYNL097C-B 123 nt-2.8□□□□□ -2.86
SNF11P38956 YKL118WYKL118W 312 nt-2.84□□□□□ -2.86
SNF11P38956 YNL277W-AYNL277W-A 189 nt-2.85□□□□□ -2.87
SNF11P38956 tL(UAA)QtL(UAA)Q 85 nt-2.86□□□□□ -2.87
SNF11P38956 YKL106C-AYKL106C-A 120 nt-2.86□□□□□ -2.87
SNF11P38956 snR6snR6 112 nt-2.89□□□□□ -2.87
SNF11P38956 YOL155W-AYOL155W-A 135 nt-2.96□□□□□ -2.88
SNF11P38956 YDR157WYDR157W 402 nt-2.98□□□□□ -2.89
SNF11P38956 snR73snR73 106 nt-3□□□□□ -2.89
SNF11P38956 YDL240C-AYDL240C-A 138 nt-3□□□□□ -2.89
SNF11P38956 YHL015W-AYHL015W-A 84 nt-3.02□□□□□ -2.89
SNF11P38956 YOR335W-AYOR335W-A 81 nt-3.02□□□□□ -2.89
SNF11P38956 snR52snR52 92 nt-3.05□□□□□ -2.9
SNF11P38956 YJL150WYJL150W 303 nt-3.06□□□□□ -2.9
SNF11P38956 snR80snR80 171 nt-3.07□□□□□ -2.9
SNF11P38956 YOR302WYOR302W 78 nt-3.08□□□□□ -2.9
SNF11P38956 YBR109W-AYBR109W-A 225 nt-3.13□□□□□ -2.91
SNF11P38956 GIM4YEL003W 336 nt-3.14□□□□□ -2.91
SNF11P38956 YDR524C-AYDR524C-A 120 nt-3.15□□□□□ -2.91
SNF11P38956 Q0142Q0142 177 nt-3.17□□□□□ -2.92
SNF11P38956 RPL41BYDL133C-A 78 nt-3.19□□□□□ -2.92
SNF11P38956 YOL166W-AYOL166W-A 156 nt-3.22□□□□□ -2.92
SNF11P38956 YNL198CYNL198C 303 nt-3.25□□□□□ -2.93
SNF11P38956 YBR296C-AYBR296C-A 120 nt-3.26□□□□□ -2.93
SNF11P38956 snR56snR56 88 nt-3.29□□□□□ -2.94
SNF11P38956 RPL41AYDL184C 78 nt-3.29□□□□□ -2.94
SNF11P38956 YDR118W-AYDR118W-A 117 nt-3.3□□□□□ -2.94
SNF11P38956 YPL152W-AYPL152W-A 99 nt-3.32□□□□□ -2.94
SNF11P38956 Q0017Q0017 162 nt-3.32□□□□□ -2.94
SNF11P38956 SOM1YEL059C-A 225 nt-3.35□□□□□ -2.95
SNF11P38956 snR38snR38 95 nt-3.38□□□□□ -2.95
SNF11P38956 snR65snR65 100 nt-3.45□□□□□ -2.96
SNF11P38956 YNL337WYNL337W 255 nt-3.52□□□□□ -2.97
SNF11P38956 YCR095W-AYCR095W-A 159 nt-3.53□□□□□ -2.97
SNF11P38956 VAR1Q0140 1197 nt-3.57□□□□□ -2.98
SNF11P38956 YDR406W-AYDR406W-A 246 nt-3.59□□□□□ -2.98
SNF11P38956 YJR162CYJR162C 351 nt-3.6□□□□□ -2.99
SNF11P38956 snR87snR87 109 nt-3.63□□□□□ -2.99
SNF11P38956 YBL053WYBL053W 375 nt-3.67□□□□□ -3
SNF11P38956 YGR151CYGR151C 336 nt-3.69□□□□□ -3
SNF11P38956 YBL071C-BYBL071C-B 99 nt-3.69□□□□□ -3
SNF11P38956 snR85snR85 171 nt-3.7□□□□□ -3
SNF11P38956 tV(UAC)QtV(UAC)Q 76 nt-3.72□□□□□ -3
SNF11P38956 YOL164W-AYOL164W-A 183 nt-3.72□□□□□ -3
SNF11P38956 YDL114W-AYDL114W-A 114 nt-3.75□□□□□ -3.01
SNF11P38956 snR47snR47 99 nt-3.78□□□□□ -3.01
SNF11P38956 YBL100W-CYBL100W-C 120 nt-3.89□□□□□ -3.03
SNF11P38956 YAL037C-AYAL037C-A 93 nt-3.95□□□□□ -3.04
SNF11P38956 YOR231C-AYOR231C-A 201 nt-3.95□□□□□ -3.04
SNF11P38956 SPG3YDR504C 384 nt-3.98□□□□□ -3.05
SNF11P38956 YKL225WYKL225W 348 nt-4.04□□□□□ -3.06
SNF11P38956 YKL096C-BYKL096C-B 150 nt-4.09□□□□□ -3.06
SNF11P38956 tS(GCU)Q1tS(GCU)Q1 86 nt-4.11□□□□□ -3.07
SNF11P38956 YHR175W-AYHR175W-A 150 nt-4.14□□□□□ -3.07
SNF11P38956 YCL001W-BYCL001W-B 255 nt-4.21□□□□□ -3.08
SNF11P38956 snR58snR58 96 nt-4.22□□□□□ -3.08
SNF11P38956 YDL159W-AYDL159W-A 132 nt-4.33□□□□□ -3.1
SNF11P38956 YGR122C-AYGR122C-A 129 nt-4.33□□□□□ -3.1
SNF11P38956 tR(ACG)Q2tR(ACG)Q2 74 nt-4.33□□□□□ -3.1
SNF11P38956 YDR034C-AYDR034C-A 177 nt-4.38□□□□□ -3.11
Retrieved 100 of 7,029 protein–RNA pairs in 144.8 ms