Protein–RNA interactions for Protein: P38042

CDC27, Anaphase-promoting complex subunit CDC27, yeastyeast

Predictions only

Length 758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC27P38042 BPH1YCR032W 6504 nt2.25□□□□□ -2.05
CDC27P38042 SSK2YNR031C 4740 nt2.24□□□□□ -2.05
CDC27P38042 YNL054W-BYNL054W-B 5250 nt2.22□□□□□ -2.05
CDC27P38042 YOR316C-AYOR316C-A 210 nt2.22□□□□□ -2.05
CDC27P38042 SPT7YBR081C 3999 nt2.21□□□□□ -2.06
CDC27P38042 LAA1YJL207C 6045 nt2.18□□□□□ -2.06
CDC27P38042 CFT1YDR301W 4074 nt2.17□□□□□ -2.06
CDC27P38042 CSF1YLR087C 8877 nt2.16□□□□□ -2.06
CDC27P38042 VAM6YDL077C 3150 nt2.15□□□□□ -2.07
CDC27P38042 FAB1YFR019W 6837 nt2.15□□□□□ -2.07
CDC27P38042 SBH2YER019C-A 267 nt2.14□□□□□ -2.07
CDC27P38042 USO1YDL058W 5373 nt2.13□□□□□ -2.07
CDC27P38042 YGR130CYGR130C 2451 nt2.12□□□□□ -2.07
CDC27P38042 YOR093CYOR093C 4947 nt2.11□□□□□ -2.07
CDC27P38042 TOR2YKL203C 7425 nt2.09□□□□□ -2.07
CDC27P38042 YPR117WYPR117W 7470 nt2.07□□□□□ -2.08
CDC27P38042 SOV1YMR066W 2697 nt2.05□□□□□ -2.08
CDC27P38042 BST1YFL025C 3090 nt2.05□□□□□ -2.08
CDC27P38042 FKS1YLR342W 5631 nt2.03□□□□□ -2.08
CDC27P38042 TRM732YMR259C 4263 nt2.02□□□□□ -2.09
CDC27P38042 PMD1YER132C 5262 nt2.02□□□□□ -2.09
CDC27P38042 MON2YNL297C 4911 nt2□□□□□ -2.09
CDC27P38042 PEP1YBL017C 4740 nt1.99□□□□□ -2.09
CDC27P38042 CDC39YCR093W 6327 nt1.99□□□□□ -2.09
CDC27P38042 YHR214C-BYHR214C-B 5382 nt1.99□□□□□ -2.09
CDC27P38042 tC(GCA)QtC(GCA)Q 76 nt1.98□□□□□ -2.09
CDC27P38042 TMA7YLR262C-A 195 nt1.95□□□□□ -2.1
CDC27P38042 YMR045CYMR045C 5268 nt1.92□□□□□ -2.1
CDC27P38042 YMR272W-BYMR272W-B 108 nt1.91□□□□□ -2.1
CDC27P38042 DNF3YMR162C 4971 nt1.85□□□□□ -2.11
CDC27P38042 LTE1YAL024C 4308 nt1.84□□□□□ -2.11
CDC27P38042 YOR192C-BYOR192C-B 5313 nt1.84□□□□□ -2.12
CDC27P38042 YMR247W-AYMR247W-A 144 nt1.82□□□□□ -2.12
CDC27P38042 tT(UGU)HtT(UGU)H 72 nt1.78□□□□□ -2.12
CDC27P38042 YJR029WYJR029W 5268 nt1.78□□□□□ -2.13
CDC27P38042 FIG2YCR089W 4830 nt1.74□□□□□ -2.13
CDC27P38042 BRR2YER172C 6492 nt1.73□□□□□ -2.13
CDC27P38042 BUD3YCL014W 4911 nt1.73□□□□□ -2.13
CDC27P38042 RPL41BYDL133C-A 78 nt1.72□□□□□ -2.13
CDC27P38042 YOL014WYOL014W 375 nt1.72□□□□□ -2.13
CDC27P38042 MEC1YBR136W 7107 nt1.7□□□□□ -2.14
CDC27P38042 YPR137C-BYPR137C-B 5268 nt1.69□□□□□ -2.14
CDC27P38042 HKR1YDR420W 5409 nt1.68□□□□□ -2.14
CDC27P38042 YBL100W-BYBL100W-B 5313 nt1.67□□□□□ -2.14
CDC27P38042 YML100W-AYML100W-A 174 nt1.65□□□□□ -2.15
CDC27P38042 tQ(UUG)E2tQ(UUG)E2 72 nt1.6□□□□□ -2.15
CDC27P38042 YJL113WYJL113W 4647 nt1.59□□□□□ -2.15
CDC27P38042 IRA1YBR140C 9279 nt1.58□□□□□ -2.16
CDC27P38042 VPS15YBR097W 4365 nt1.56□□□□□ -2.16
CDC27P38042 THO2YNL139C 4794 nt1.54□□□□□ -2.16
CDC27P38042 snR58snR58 96 nt1.53□□□□□ -2.16
CDC27P38042 RKR1YMR247C 4689 nt1.53□□□□□ -2.16
CDC27P38042 PAU24YBR301W 363 nt1.53□□□□□ -2.16
CDC27P38042 CCH1YGR217W 6120 nt1.52□□□□□ -2.17
CDC27P38042 YKL145W-AYKL145W-A 93 nt1.51□□□□□ -2.17
CDC27P38042 MLP1YKR095W 5628 nt1.5□□□□□ -2.17
CDC27P38042 SCC2YDR180W 4482 nt1.49□□□□□ -2.17
CDC27P38042 BEM2YER155C 6504 nt1.47□□□□□ -2.17
CDC27P38042 MYO1YHR023W 5787 nt1.46□□□□□ -2.18
CDC27P38042 ESP1YGR098C 4893 nt1.45□□□□□ -2.18
CDC27P38042 IML1YJR138W 4755 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)E1tH(GUG)E1 72 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)E2tH(GUG)E2 72 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)G1tH(GUG)G1 72 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)G2tH(GUG)G2 72 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)HtH(GUG)H 72 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)KtH(GUG)K 72 nt1.42□□□□□ -2.18
CDC27P38042 tH(GUG)MtH(GUG)M 72 nt1.42□□□□□ -2.18
CDC27P38042 YOR186C-AYOR186C-A 210 nt1.41□□□□□ -2.18
CDC27P38042 YOR335W-AYOR335W-A 81 nt1.37□□□□□ -2.19
CDC27P38042 FMP27YLR454W 7887 nt1.35□□□□□ -2.19
CDC27P38042 tV(UAC)BtV(UAC)B 74 nt1.32□□□□□ -2.2
CDC27P38042 tV(UAC)DtV(UAC)D 74 nt1.32□□□□□ -2.2
CDC27P38042 PAU9YBL108C-A 129 nt1.32□□□□□ -2.2
CDC27P38042 DOP1YDR141C 5097 nt1.25□□□□□ -2.21
CDC27P38042 IQG1YPL242C 4488 nt1.25□□□□□ -2.21
CDC27P38042 snR6snR6 112 nt1.24□□□□□ -2.21
CDC27P38042 YMR272W-AYMR272W-A 114 nt1.13□□□□□ -2.23
CDC27P38042 UTP20YBL004W 7482 nt1.13□□□□□ -2.23
CDC27P38042 snR73snR73 106 nt1.05□□□□□ -2.24
CDC27P38042 snR161snR161 161 nt1.04□□□□□ -2.24
CDC27P38042 snR128snR128 126 nt0.98□□□□□ -2.25
CDC27P38042 tF(GAA)BtF(GAA)B 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)FtF(GAA)F 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)GtF(GAA)G 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)H1tF(GAA)H1 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)H2tF(GAA)H2 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)MtF(GAA)M 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)P1tF(GAA)P1 73 nt0.95□□□□□ -2.26
CDC27P38042 tF(GAA)P2tF(GAA)P2 73 nt0.95□□□□□ -2.26
CDC27P38042 UTP10YJL109C 5310 nt0.94□□□□□ -2.26
CDC27P38042 EMT1tM(CAU)D 73 nt0.91□□□□□ -2.26
CDC27P38042 EMT5tM(CAU)J1 73 nt0.91□□□□□ -2.26
CDC27P38042 EMT3tM(CAU)J2 73 nt0.91□□□□□ -2.26
CDC27P38042 EMT4tM(CAU)M 73 nt0.91□□□□□ -2.26
CDC27P38042 EMT2tM(CAU)O2 73 nt0.91□□□□□ -2.26
CDC27P38042 tA(UGC)QtA(UGC)Q 76 nt0.86□□□□□ -2.27
CDC27P38042 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
CDC27P38042 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
CDC27P38042 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms