Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
CROCCP2Q86T23 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CROCCP2Q86T23 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.32■■□□□ 1.8
CROCCP2Q86T23 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CROCCP2Q86T23 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CROCCP2Q86T23 DYNLL1-208ENST00000550178 581 ntBASIC26.32■■□□□ 1.8
CROCCP2Q86T23 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.32■■□□□ 1.8
CROCCP2Q86T23 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CROCCP2Q86T23 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.31■■□□□ 1.8
CROCCP2Q86T23 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.3■■□□□ 1.8
CROCCP2Q86T23 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CROCCP2Q86T23 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CROCCP2Q86T23 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CROCCP2Q86T23 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CROCCP2Q86T23 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CROCCP2Q86T23 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CROCCP2Q86T23 ZNRF2P1-201ENST00000441407 443 ntBASIC26.28■■□□□ 1.8
CROCCP2Q86T23 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CROCCP2Q86T23 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CROCCP2Q86T23 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CROCCP2Q86T23 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CROCCP2Q86T23 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.27■■□□□ 1.8
CROCCP2Q86T23 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CROCCP2Q86T23 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CROCCP2Q86T23 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CROCCP2Q86T23 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CROCCP2Q86T23 AC010864.1-201ENST00000609407 1511 ntBASIC26.26■■□□□ 1.79
CROCCP2Q86T23 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.26■■□□□ 1.79
CROCCP2Q86T23 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CROCCP2Q86T23 AP004833.2-201ENST00000532228 1454 ntBASIC26.25■■□□□ 1.79
CROCCP2Q86T23 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.24■■□□□ 1.79
CROCCP2Q86T23 WASH5P-204ENST00000632292 975 ntBASIC26.24■■□□□ 1.79
CROCCP2Q86T23 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CROCCP2Q86T23 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CROCCP2Q86T23 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CROCCP2Q86T23 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CROCCP2Q86T23 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CROCCP2Q86T23 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.23■■□□□ 1.79
CROCCP2Q86T23 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CROCCP2Q86T23 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CROCCP2Q86T23 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CROCCP2Q86T23 AC135731.1-201ENST00000569415 2548 ntBASIC26.21■■□□□ 1.79
CROCCP2Q86T23 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CROCCP2Q86T23 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CROCCP2Q86T23 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.19■■□□□ 1.78
CROCCP2Q86T23 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CROCCP2Q86T23 AL031258.1-201ENST00000623562 325 ntBASIC26.19■■□□□ 1.78
CROCCP2Q86T23 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CROCCP2Q86T23 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CROCCP2Q86T23 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CROCCP2Q86T23 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CROCCP2Q86T23 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CROCCP2Q86T23 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CROCCP2Q86T23 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.16■■□□□ 1.78
CROCCP2Q86T23 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.15■■□□□ 1.78
CROCCP2Q86T23 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CROCCP2Q86T23 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CROCCP2Q86T23 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CROCCP2Q86T23 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.14■■□□□ 1.78
CROCCP2Q86T23 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CROCCP2Q86T23 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
CROCCP2Q86T23 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CROCCP2Q86T23 LINC01003-201ENST00000564834 1764 ntBASIC26.12■■□□□ 1.77
CROCCP2Q86T23 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CROCCP2Q86T23 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CROCCP2Q86T23 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CROCCP2Q86T23 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.1■■□□□ 1.77
CROCCP2Q86T23 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.1■■□□□ 1.77
CROCCP2Q86T23 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.09■■□□□ 1.77
CROCCP2Q86T23 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.09■■□□□ 1.77
CROCCP2Q86T23 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
CROCCP2Q86T23 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CROCCP2Q86T23 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CROCCP2Q86T23 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CROCCP2Q86T23 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CROCCP2Q86T23 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.06■■□□□ 1.76
CROCCP2Q86T23 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CROCCP2Q86T23 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
CROCCP2Q86T23 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CROCCP2Q86T23 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CROCCP2Q86T23 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CROCCP2Q86T23 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CROCCP2Q86T23 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CROCCP2Q86T23 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CROCCP2Q86T23 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.04■■□□□ 1.76
CROCCP2Q86T23 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CROCCP2Q86T23 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.04■■□□□ 1.76
CROCCP2Q86T23 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.04■■□□□ 1.76
CROCCP2Q86T23 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CROCCP2Q86T23 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CROCCP2Q86T23 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.03■■□□□ 1.76
CROCCP2Q86T23 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CROCCP2Q86T23 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CROCCP2Q86T23 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms